Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 POLR1E-201ENST00000377792 2229 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF214-201ENST00000278314 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC004947.2-201ENST00000623092 2671 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF184-201ENST00000211936 3101 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPP14-201ENST00000295959 3121 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 LGALS9-203ENST00000395473 3114 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC008966.1-203ENST00000499459 3137 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 VPS13A-204ENST00000376634 10269 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 CDC25B-201ENST00000245960 3597 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AOC3-201ENST00000308423 4026 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 FOXN4-201ENST00000299162 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 FGF1-203ENST00000360966 695 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 GSTZ1-203ENST00000361389 1010 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SKP292-201ENST00000365522 317 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 C1orf61-204ENST00000368243 879 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 PRUNE1-204ENST00000368936 2788 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 NR2E1-201ENST00000368983 2612 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AKNAD1-202ENST00000369995 2641 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR34C-201ENST00000384831 77 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR34A-201ENST00000385130 110 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA40.6-201ENST00000391153 128 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MCF2L-206ENST00000397021 576 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL357515.1-201ENST00000402967 542 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNRPEP6-201ENST00000407465 277 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 M1AP-202ENST00000409585 2457 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPL31P2-201ENST00000413849 377 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL157831.1-201ENST00000426134 473 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPL23AP95-201ENST00000426806 265 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL353572.2-201ENST00000427728 748 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 OR7E110P-201ENST00000431186 574 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC008132.2-201ENST00000437537 391 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL590822.1-201ENST00000442483 326 ntTSL 3 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL358176.5-201ENST00000442611 385 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL358613.1-201ENST00000444965 442 ntTSL 3 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 C11orf94-201ENST00000449465 369 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL031847.1-201ENST00000455744 378 ntTSL 3 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RPL23AP56-201ENST00000460778 453 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL150P-201ENST00000462298 262 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL851P-201ENST00000480512 303 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 OR9P1P-201ENST00000496431 281 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RN7SL317P-201ENST00000497408 329 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 FTH1P24-201ENST00000503502 462 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC234781.5-201ENST00000508429 271 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU7-149P-201ENST00000516739 59 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA50B-201ENST00000517198 135 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RNU6-840P-201ENST00000517275 65 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC015909.2-201ENST00000523083 547 ntTSL 3 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 IGLCOR22-1-201ENST00000523725 316 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MEOX1-204ENST00000549132 1152 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC022748.2-201ENST00000569846 568 ntTSL 4 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC097641.2-201ENST00000581517 325 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 MIR5197-201ENST00000583721 112 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 RMRP-201ENST00000602361 268 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC019322.2-201ENST00000605634 147 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC123788.2-201ENST00000612290 283 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL355994.5-201ENST00000613591 236 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 Metazoa_SRP.88-201ENST00000615890 269 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 uc_338.10-201ENST00000621872 182 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 CU638689.3-201ENST00000624266 1031 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SNORA50B-202ENST00000630737 137 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 AL512310.12-203ENST00000640543 90 ntBASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 DCLK3-203ENST00000636136 5446 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 CDK14-202ENST00000380050 4995 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 ZNF391-201ENST00000244576 4079 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 SEC24B-203ENST00000504968 4066 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 GPATCH11-202ENST00000409774 3906 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 BAG6-237ENST00000375976 3644 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
KRTAP9-4Q9BYQ2 OR10H5-202ENST00000642092 7044 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms