Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
VRK1Q99986 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.49□□□□□ -1.53
VRK1Q99986 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
VRK1Q99986 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VRK1Q99986 AC125238.2-201ENST00000430003 1440 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC053481.2-202ENST00000582394 1500 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 SAGE3P-201ENST00000619800 1635 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 CREM-217ENST00000439705 2306 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 AC020656.2-201ENST00000613291 5309 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VRK1Q99986 GCNT1P4-201ENST00000404096 329 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC114814.2-201ENST00000419195 485 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 USP9YP31-201ENST00000431405 881 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC005345.1-201ENST00000431868 217 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 RPL21P110-201ENST00000433345 446 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 USP9YP22-201ENST00000438971 294 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL445567.1-201ENST00000439121 144 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL645936.1-201ENST00000441979 518 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 POU5F1P5-201ENST00000445059 658 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 HMGB1P16-201ENST00000447155 540 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 HMGB1P7-201ENST00000450921 612 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL133244.1-201ENST00000456007 258 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 SNX18P26-201ENST00000458433 740 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 RN7SL254P-201ENST00000460609 284 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL161747.1-201ENST00000480068 358 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AP002453.1-201ENST00000492327 668 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 SNX18P24-201ENST00000505249 671 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC020937.1-201ENST00000519677 1013 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AL133399.1-201ENST00000527476 298 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC026826.3-201ENST00000561747 158 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.48□□□□□ -1.53
VRK1Q99986 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 MTCYBP33-201ENST00000575007 1130 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 OR1E3-201ENST00000575608 948 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC100767.2-201ENST00000604840 693 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 AC012557.2-201ENST00000605919 418 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 AC006840.1-201ENST00000623069 542 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 MIR4278-201ENST00000636094 69 ntBASIC5.48□□□□□ -1.53
VRK1Q99986 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.48□□□□□ -1.53
VRK1Q99986 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.48□□□□□ -1.53
VRK1Q99986 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VRK1Q99986 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms