Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC004980.3-201ENST00000447046 365 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC108693.1-201ENST00000496068 432 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC104109.1-201ENST00000498563 436 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC010350.1-201ENST00000504908 231 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 UGT2A3P7-201ENST00000510485 734 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC024940.3-201ENST00000538551 316 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC090022.1-201ENST00000546569 311 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC090527.3-201ENST00000619041 548 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL355480.1-201ENST00000629041 99 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC083843.3-201ENST00000623679 2186 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AL022393.1-201ENST00000625142 1677 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 AC120338.1-201ENST00000625074 1541 ntBASIC4.82□□□□□ -1.64
CLHC1Q8NHS4 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL672167.1-205ENST00000641112 3080 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 RN7SKP15-201ENST00000364742 309 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 NUDT19P3-201ENST00000404698 555 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 DUTP5-201ENST00000406790 469 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 RN7SKP114-201ENST00000410327 279 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 RN7SKP126-201ENST00000411143 300 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 RPL34P6-201ENST00000432390 345 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 GTF3AP5-201ENST00000442645 697 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC099063.2-201ENST00000446360 662 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 BTF3P6-201ENST00000448054 499 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC243772.1-201ENST00000451620 410 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC016724.1-201ENST00000453215 421 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL136038.1-201ENST00000497246 351 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 NPM1P6-201ENST00000521088 871 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC005868.1-201ENST00000536421 331 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL713998.2-201ENST00000604538 1198 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL133406.3-201ENST00000606817 541 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AL049767.1-202ENST00000637826 242 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AP000542.2-201ENST00000623199 6179 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 AC068446.1-201ENST00000556425 1549 ntBASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CLHC1Q8NHS4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 HSPA8P18-201ENST00000439846 1928 ntBASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 MIR323A-201ENST00000362199 86 ntBASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 RNA5SP183-201ENST00000362452 119 ntBASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 OR3A2-201ENST00000408891 1076 ntBASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CLHC1Q8NHS4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms