Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 MRRFP1-201ENST00000435941 1675 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AL606537.1-201ENST00000607258 2011 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC025125.1-201ENST00000624743 1922 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AL442128.2-201ENST00000620246 1824 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 Y_RNA.25-201ENST00000362528 102 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 LCN1P2-201ENST00000372030 223 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 SNORD116-23-201ENST00000384645 92 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 SMARCE1P6-201ENST00000398372 1216 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 RN7SKP281-201ENST00000410472 352 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC097463.1-201ENST00000447288 481 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 KATNBL1P6-201ENST00000453433 915 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 KBTBD8-202ENST00000460576 984 ntTSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 RPL12P30-201ENST00000488389 499 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC011352.3-201ENST00000505162 593 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 RNU6-720P-201ENST00000516363 108 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 RNU6-1261P-201ENST00000517194 104 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 IGLVIV-64-201ENST00000518581 301 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC018442.3-201ENST00000523025 183 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 CYCSP38-201ENST00000559840 322 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 MIR4701-201ENST00000583094 63 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 MIR4719-201ENST00000585233 84 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 AL096712.1-201ENST00000614561 159 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC243756.2-201ENST00000618406 463 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 AC091932.2-201ENST00000623014 291 ntBASIC7□□□□□ -1.29
NPAS4Q8IUM7 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 OPALIN-202ENST00000393870 3578 ntTSL 3 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 TRPM3-212ENST00000396283 3484 ntTSL 5 BASIC7□□□□□ -1.29
NPAS4Q8IUM7 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
NPAS4Q8IUM7 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 PHKB-201ENST00000299167 5464 ntTSL 5 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 LPAL2-203ENST00000454031 2498 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 RNU6-115P-201ENST00000364310 107 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 RNU6-1122P-201ENST00000384449 107 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 RNU2-16P-201ENST00000410712 136 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 MGAT2P2-201ENST00000427194 797 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 AC003989.1-201ENST00000434569 565 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 MTCO1P19-201ENST00000443487 500 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 NDUFA5P7-201ENST00000452914 242 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 CFTRP1-201ENST00000456646 183 ntBASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.99□□□□□ -1.29
NPAS4Q8IUM7 NF1P3-201ENST00000457709 450 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms