Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC008957.3-201ENST00000624112 2242 ntBASIC6.6□□□□□ -1.35
PCDH1Q08174 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 MTND4P16-201ENST00000466108 1367 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AL596244.1-201ENST00000567068 3779 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC062029.1-202ENST00000606164 3651 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDH1Q08174 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDH1Q08174 RNU6-1066P-201ENST00000363573 105 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 Y_RNA.402-201ENST00000383972 102 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AL450992.3-201ENST00000413192 568 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 CBX1P3-201ENST00000413296 527 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AL034379.1-201ENST00000423216 253 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDH1Q08174 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 FGF13-AS1-201ENST00000438238 849 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 PMS2P9-201ENST00000441237 515 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDH1Q08174 RPL39P6-201ENST00000448289 150 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDH1Q08174 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC010307.1-201ENST00000467206 836 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC112206.1-201ENST00000468416 477 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 IGKV1D-32-201ENST00000517449 318 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 RPL3P13-201ENST00000550415 216 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC106785.4-201ENST00000569492 412 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC004232.1-201ENST00000571388 208 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 MIR5095-201ENST00000578844 88 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 UBE2V2P2-201ENST00000587677 504 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.59□□□□□ -1.35
PCDH1Q08174 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 AL161729.4-201ENST00000604650 476 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 RNU6-88P-201ENST00000606801 100 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AL359535.1-201ENST00000612100 1087 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 AC103564.3-201ENST00000621194 220 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC6.59□□□□□ -1.35
PCDH1Q08174 CRYM-AS1-204ENST00000637983 556 ntBASIC6.59□□□□□ -1.35
PCDH1Q08174 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
PCDH1Q08174 KYNU-203ENST00000409512 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.59□□□□□ -1.35
PCDH1Q08174 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
PCDH1Q08174 CDR1-202ENST00000625883 1485 ntBASIC6.59□□□□□ -1.36
PCDH1Q08174 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH1Q08174 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH1Q08174 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH1Q08174 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH1Q08174 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.59□□□□□ -1.36
PCDH1Q08174 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
PCDH1Q08174 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 CCDC150P1-201ENST00000537123 2215 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 AL031985.3-201ENST00000565390 2449 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.58□□□□□ -1.36
PCDH1Q08174 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AL034370.1-201ENST00000397254 1590 ntBASIC6.58□□□□□ -1.36
PCDH1Q08174 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 AQP4-205ENST00000581374 1586 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PCDH1Q08174 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PCDH1Q08174 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms