Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 LINC01963-201ENST00000562038 3148 ntBASIC5.27□□□□□ -1.57
RAE1P78406 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 AC092681.1-201ENST00000297369 291 ntBASIC5.27□□□□□ -1.57
RAE1P78406 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAE1P78406 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAE1P78406 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 UBE2Q2P1-202ENST00000354771 883 ntBASIC5.27□□□□□ -1.57
RAE1P78406 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 DNAJC19P6-201ENST00000401853 280 ntBASIC5.27□□□□□ -1.57
RAE1P78406 MTND4P13-201ENST00000402078 1023 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AL021331.1-201ENST00000402817 582 ntBASIC5.27□□□□□ -1.57
RAE1P78406 SLC20A1P1-201ENST00000413906 956 ntBASIC5.27□□□□□ -1.57
RAE1P78406 RPS24P7-201ENST00000416921 246 ntBASIC5.27□□□□□ -1.57
RAE1P78406 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 AC093155.2-201ENST00000420734 937 ntBASIC5.27□□□□□ -1.57
RAE1P78406 OR2X1P-201ENST00000421144 687 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC113412.1-201ENST00000425840 504 ntBASIC5.27□□□□□ -1.57
RAE1P78406 RPS4XP16-201ENST00000427198 791 ntBASIC5.27□□□□□ -1.57
RAE1P78406 FO393419.3-201ENST00000428741 282 ntBASIC5.27□□□□□ -1.57
RAE1P78406 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 RPL7P34-201ENST00000433316 712 ntBASIC5.27□□□□□ -1.57
RAE1P78406 MRPL35P2-201ENST00000448009 511 ntBASIC5.27□□□□□ -1.57
RAE1P78406 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 AC079203.1-201ENST00000487972 404 ntBASIC5.27□□□□□ -1.57
RAE1P78406 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC5.27□□□□□ -1.57
RAE1P78406 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.27□□□□□ -1.57
RAE1P78406 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC104417.1-201ENST00000523974 751 ntBASIC5.27□□□□□ -1.57
RAE1P78406 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 OR11H3P-201ENST00000554547 982 ntBASIC5.27□□□□□ -1.57
RAE1P78406 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RAE1P78406 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AC009097.3-201ENST00000563557 1018 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 AC145350.1-201ENST00000567426 208 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.27□□□□□ -1.57
RAE1P78406 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.27□□□□□ -1.57
RAE1P78406 AL049844.2-201ENST00000604280 628 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AL162574.1-201ENST00000615702 950 ntBASIC5.27□□□□□ -1.57
RAE1P78406 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 FRG1HP-204ENST00000617940 757 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC073569.3-201ENST00000619055 682 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC123767.1-202ENST00000620407 817 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 AC022079.1-201ENST00000621546 602 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AC011815.3-201ENST00000624194 473 ntBASIC5.27□□□□□ -1.57
RAE1P78406 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.27□□□□□ -1.57
RAE1P78406 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.27□□□□□ -1.57
RAE1P78406 FRG1EP-201ENST00000634469 770 ntBASIC5.27□□□□□ -1.57
RAE1P78406 AL137141.1-201ENST00000624622 4836 ntBASIC5.27□□□□□ -1.57
RAE1P78406 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RAE1P78406 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RAE1P78406 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
RAE1P78406 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.26□□□□□ -1.57
RAE1P78406 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.26□□□□□ -1.57
RAE1P78406 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RAE1P78406 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 AC114786.1-201ENST00000512892 1415 ntBASIC5.26□□□□□ -1.57
RAE1P78406 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RAE1P78406 AC100757.1-201ENST00000616872 1835 ntBASIC5.26□□□□□ -1.57
RAE1P78406 ANKRD36P1-201ENST00000344424 659 ntBASIC5.26□□□□□ -1.57
RAE1P78406 RNU4-68P-201ENST00000364314 141 ntBASIC5.26□□□□□ -1.57
RAE1P78406 RNU4-40P-201ENST00000364351 143 ntBASIC5.26□□□□□ -1.57
RAE1P78406 MIR142-201ENST00000384835 87 ntBASIC5.26□□□□□ -1.57
RAE1P78406 PPIAP9-201ENST00000403866 498 ntBASIC5.26□□□□□ -1.57
RAE1P78406 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RAE1P78406 MTCO3P4-201ENST00000419236 787 ntBASIC5.26□□□□□ -1.57
RAE1P78406 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.26□□□□□ -1.57
RAE1P78406 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.26□□□□□ -1.57
RAE1P78406 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.26□□□□□ -1.57
RAE1P78406 RPL23AP4-201ENST00000427757 463 ntBASIC5.26□□□□□ -1.57
RAE1P78406 AC084290.1-201ENST00000434995 374 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms