Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 AP002884.5-201ENST00000595053 1132 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.87□□□□□ -1.47
CIITAP33076 BNIP3P31-201ENST00000604515 566 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC017076.1-201ENST00000607613 578 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AL355802.4-201ENST00000607635 548 ntBASIC5.87□□□□□ -1.47
CIITAP33076 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CIITAP33076 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 AL049777.1-201ENST00000622740 518 ntBASIC5.87□□□□□ -1.47
CIITAP33076 MTND4P9-201ENST00000507819 1346 ntBASIC5.87□□□□□ -1.47
CIITAP33076 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CIITAP33076 HSPA8P19-201ENST00000505359 1517 ntBASIC5.87□□□□□ -1.47
CIITAP33076 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CIITAP33076 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.87□□□□□ -1.47
CIITAP33076 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CIITAP33076 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AC003985.2-201ENST00000562268 1669 ntBASIC5.86□□□□□ -1.47
CIITAP33076 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.86□□□□□ -1.47
CIITAP33076 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
CIITAP33076 SNORA27.3-201ENST00000364937 134 ntBASIC5.86□□□□□ -1.47
CIITAP33076 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 RSL24D1P1-201ENST00000404972 493 ntBASIC5.86□□□□□ -1.47
CIITAP33076 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.86□□□□□ -1.47
CIITAP33076 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 BX842559.2-201ENST00000451418 605 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 OR9N1P-201ENST00000491296 333 ntBASIC5.86□□□□□ -1.47
CIITAP33076 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.86□□□□□ -1.47
CIITAP33076 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.86□□□□□ -1.47
CIITAP33076 EIF3KP3-201ENST00000514461 639 ntBASIC5.86□□□□□ -1.47
CIITAP33076 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
CIITAP33076 HMGN2P6-201ENST00000551091 273 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AC023158.1-201ENST00000561632 1025 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC027281.1-201ENST00000574178 758 ntBASIC5.86□□□□□ -1.47
CIITAP33076 MIR3691-201ENST00000578066 90 ntBASIC5.86□□□□□ -1.47
CIITAP33076 MTCYBP13-201ENST00000578634 1093 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.86□□□□□ -1.47
CIITAP33076 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 AC245884.10-201ENST00000597355 337 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.86□□□□□ -1.47
CIITAP33076 AC015660.5-201ENST00000623238 564 ntBASIC5.86□□□□□ -1.47
CIITAP33076 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.86□□□□□ -1.47
CIITAP33076 ADAM24P-201ENST00000398655 2101 ntBASIC5.86□□□□□ -1.47
CIITAP33076 AC114947.2-201ENST00000565748 2125 ntBASIC5.86□□□□□ -1.47
CIITAP33076 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CIITAP33076 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 AC087565.3-202ENST00000642085 1603 ntBASIC5.85□□□□□ -1.47
CIITAP33076 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CIITAP33076 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 MTCO1P7-201ENST00000419523 1542 ntBASIC5.85□□□□□ -1.47
CIITAP33076 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
CIITAP33076 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 RNA5SP507-201ENST00000363603 121 ntBASIC5.85□□□□□ -1.47
CIITAP33076 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 MIR620-201ENST00000385232 95 ntBASIC5.85□□□□□ -1.47
CIITAP33076 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 DDX39BP1-205ENST00000422507 192 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.85□□□□□ -1.47
CIITAP33076 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.85□□□□□ -1.47
CIITAP33076 FCF1P6-201ENST00000456841 595 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AC109462.1-201ENST00000491087 368 ntBASIC5.85□□□□□ -1.47
CIITAP33076 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.85□□□□□ -1.47
CIITAP33076 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CIITAP33076 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.85□□□□□ -1.47
CIITAP33076 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AC027308.1-201ENST00000517993 110 ntBASIC5.85□□□□□ -1.47
CIITAP33076 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.85□□□□□ -1.47
CIITAP33076 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 CD69-203ENST00000536709 1020 ntTSL 2 BASIC5.85□□□□□ -1.47
CIITAP33076 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.85□□□□□ -1.47
CIITAP33076 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CIITAP33076 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms