Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXD8P13378 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXD8P13378 TATDN2P3-201ENST00000452855 3665 ntBASIC7.12□□□□□ -1.27
HOXD8P13378 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.12□□□□□ -1.27
HOXD8P13378 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
HOXD8P13378 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXD8P13378 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXD8P13378 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.12□□□□□ -1.27
HOXD8P13378 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HOXD8P13378 CCDC162P-202ENST00000368966 6751 ntBASIC7.12□□□□□ -1.27
HOXD8P13378 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
HOXD8P13378 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.12□□□□□ -1.27
HOXD8P13378 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HOXD8P13378 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 SLC14A1-208ENST00000586142 2846 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 RNA5SP346-201ENST00000363541 121 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 AC004386.1-201ENST00000393214 761 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC008171.1-201ENST00000395058 200 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 RN7SKP285-201ENST00000410137 318 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 CCNB1IP1P1-201ENST00000428976 839 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 CEACAMP5-201ENST00000448037 961 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 AL034418.1-201ENST00000448675 860 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC068228.1-201ENST00000461723 211 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC135999.1-201ENST00000478962 479 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 RPL7P24-201ENST00000493052 752 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC108941.1-201ENST00000502853 530 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 SNX18P24-201ENST00000505249 671 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC022483.1-201ENST00000514020 567 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 COX6B1P4-201ENST00000519826 484 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 RAB11AP2-201ENST00000545905 639 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 GTF2IP22-201ENST00000554443 182 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC7.11□□□□□ -1.27
HOXD8P13378 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC087045.1-201ENST00000605856 382 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 MIR6729-201ENST00000618194 65 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC7.11□□□□□ -1.27
HOXD8P13378 AC007342.8-201ENST00000623278 678 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 ZBED3-AS1-216ENST00000515356 1987 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 IKZF3-215ENST00000535189 1996 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 PPP2R5C-205ENST00000445439 1526 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
HOXD8P13378 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HOXD8P13378 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.11□□□□□ -1.27
HOXD8P13378 AP004289.1-201ENST00000436307 2205 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 ZNF680P1-201ENST00000436625 1469 ntBASIC7.11□□□□□ -1.27
HOXD8P13378 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXD8P13378 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HOXD8P13378 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXD8P13378 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXD8P13378 AL596244.1-201ENST00000567068 3779 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXD8P13378 AC109315.1-201ENST00000584143 1347 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC7.1□□□□□ -1.27
HOXD8P13378 HDAC9-202ENST00000405010 4239 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HOXD8P13378 OR2M1P-201ENST00000318104 951 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 Y_RNA.9-201ENST00000362354 101 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 RNU6-374P-201ENST00000364146 108 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 Y_RNA.302-201ENST00000364997 102 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 ESD-201ENST00000378697 1079 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXD8P13378 RNU6-1009P-201ENST00000390996 107 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 AC007066.1-201ENST00000392902 381 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 TANK-203ENST00000402568 878 ntTSL 5 BASIC7.1□□□□□ -1.27
HOXD8P13378 FGF7P8-201ENST00000402994 292 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 CIR1P3-201ENST00000405137 479 ntBASIC7.1□□□□□ -1.27
HOXD8P13378 AP000357.1-201ENST00000409926 1165 ntBASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms