Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL139095.3-201ENST00000419672 1203 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 RPL23AP53-201ENST00000521854 457 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 TOMM20P2-201ENST00000540082 421 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC020634.1-201ENST00000608701 549 ntBASIC5.72□□□□□ -1.49
COL4A1P02462 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.72□□□□□ -1.49
COL4A1P02462 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL4A1P02462 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
COL4A1P02462 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL4A1P02462 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL4A1P02462 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL4A1P02462 AC108751.5-201ENST00000492880 1336 ntBASIC5.71□□□□□ -1.49
COL4A1P02462 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.71□□□□□ -1.49
COL4A1P02462 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A1P02462 AC010401.2-201ENST00000575137 4934 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 UGT2B26P-201ENST00000508672 1613 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
COL4A1P02462 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 AC008549.2-201ENST00000333482 706 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 E2F6P2-201ENST00000420708 748 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A1P02462 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.71□□□□□ -1.5
COL4A1P02462 AL109766.1-201ENST00000555080 552 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 AC069061.3-201ENST00000582254 823 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.71□□□□□ -1.5
COL4A1P02462 AL035461.2-201ENST00000619201 524 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 AC002044.3-201ENST00000623314 541 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 AC073136.1-201ENST00000449426 2884 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 EYA4-206ENST00000431403 2154 ntTSL 5 BASIC5.71□□□□□ -1.5
COL4A1P02462 AL121950.1-201ENST00000624993 2077 ntBASIC5.71□□□□□ -1.5
COL4A1P02462 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.71□□□□□ -1.5
COL4A1P02462 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL4A1P02462 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A1P02462 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 ZNF137P-201ENST00000456718 1920 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A1P02462 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 RNU1-13P-201ENST00000384499 162 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A1P02462 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.7□□□□□ -1.5
COL4A1P02462 AL354766.1-201ENST00000423396 542 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 AL451139.1-201ENST00000434718 346 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 AC010618.1-201ENST00000469924 477 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A1P02462 AC041039.1-201ENST00000485656 536 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 RNA5SP464-201ENST00000516251 108 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.7□□□□□ -1.5
COL4A1P02462 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A1P02462 AC015912.2-201ENST00000571053 181 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 CYCSP40-201ENST00000575927 294 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A1P02462 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 BX005214.3-202ENST00000619809 325 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 OR2L1P-202ENST00000641567 1023 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
COL4A1P02462 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.7□□□□□ -1.5
COL4A1P02462 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL4A1P02462 NOL8P1-201ENST00000508336 3529 ntBASIC5.7□□□□□ -1.5
COL4A1P02462 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.7□□□□□ -1.5
COL4A1P02462 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A1P02462 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
COL4A1P02462 SALL4P2-201ENST00000423288 2910 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 MTCYBP21-201ENST00000443300 1113 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 BTF3P6-201ENST00000448054 499 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 RHEBP2-201ENST00000450289 600 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A1P02462 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.69□□□□□ -1.5
COL4A1P02462 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.69□□□□□ -1.5
COL4A1P02462 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 AL392048.1-201ENST00000613946 534 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 AC009120.7-201ENST00000623452 780 ntBASIC5.69□□□□□ -1.5
COL4A1P02462 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 PRDM2-201ENST00000235372 7957 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.69□□□□□ -1.5
COL4A1P02462 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
COL4A1P02462 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
COL4A1P02462 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms