Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AL445423.1-201ENST00000609941 536 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 OR56B2P-202ENST00000641377 2453 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AL137100.1-201ENST00000556703 1620 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.83□□□□□ -1.48
COL1A1P02452 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
COL1A1P02452 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.83□□□□□ -1.48
COL1A1P02452 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 TLK1P1-201ENST00000456760 2440 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 ADAM5-202ENST00000399789 1942 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.83□□□□□ -1.48
COL1A1P02452 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 SNORD113.2-201ENST00000364166 89 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 RNU1-82P-201ENST00000390851 165 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 RNA5SP397-201ENST00000391323 118 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC5.83□□□□□ -1.48
COL1A1P02452 RPL12P34-201ENST00000424532 479 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC079168.2-201ENST00000453977 416 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC020898.1-201ENST00000474167 787 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.83□□□□□ -1.48
COL1A1P02452 NIP7P2-201ENST00000485801 544 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.83□□□□□ -1.48
COL1A1P02452 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.83□□□□□ -1.48
COL1A1P02452 AL356218.2-201ENST00000605264 187 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC092653.1-201ENST00000608509 531 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.82□□□□□ -1.48
COL1A1P02452 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 AC007382.1-201ENST00000624376 2618 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.82□□□□□ -1.48
COL1A1P02452 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 ATG4AP1-201ENST00000416893 538 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 CENPIP1-201ENST00000425713 902 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.82□□□□□ -1.48
COL1A1P02452 AC108463.1-201ENST00000450258 347 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.82□□□□□ -1.48
COL1A1P02452 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.82□□□□□ -1.48
COL1A1P02452 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.82□□□□□ -1.48
COL1A1P02452 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
COL1A1P02452 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC5.82□□□□□ -1.48
COL1A1P02452 AC133555.2-201ENST00000550213 292 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 AC090286.3-201ENST00000573133 187 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 AL590392.1-201ENST00000604960 446 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 AL450345.1-202ENST00000605741 3881 ntBASIC5.82□□□□□ -1.48
COL1A1P02452 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
COL1A1P02452 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
COL1A1P02452 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
COL1A1P02452 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
COL1A1P02452 ARL4AP5-201ENST00000404372 599 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 GTF2IP2-201ENST00000424290 697 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 MTCYBP21-201ENST00000443300 1113 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 RN7SL517P-201ENST00000462240 305 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.81□□□□□ -1.48
COL1A1P02452 MYL12BP2-201ENST00000503948 512 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.81□□□□□ -1.48
COL1A1P02452 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC5.81□□□□□ -1.48
COL1A1P02452 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.81□□□□□ -1.48
COL1A1P02452 AC103792.1-201ENST00000603591 919 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 AC009951.1-201ENST00000623674 2614 ntBASIC5.81□□□□□ -1.48
COL1A1P02452 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
COL1A1P02452 BCORP1-203ENST00000513194 5093 ntBASIC5.8□□□□□ -1.48
COL1A1P02452 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.8□□□□□ -1.48
COL1A1P02452 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
COL1A1P02452 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms