Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AL953862.2-201ENST00000603089 820 ntBASIC8.05□□□□□ -1.12
RNF40O75150 Z84480.1-201ENST00000605131 311 ntBASIC8.05□□□□□ -1.12
RNF40O75150 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 BX005040.2-201ENST00000620504 370 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL450226.2-201ENST00000622913 439 ntBASIC8.05□□□□□ -1.12
RNF40O75150 AL138924.1-201ENST00000629067 415 ntTSL 3 BASIC8.05□□□□□ -1.12
RNF40O75150 SPRR5-201ENST00000636302 817 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 AC135068.12-201ENST00000637370 931 ntBASIC8.05□□□□□ -1.12
RNF40O75150 LINC01232-204ENST00000626729 2796 ntTSL 2 BASIC8.05□□□□□ -1.12
RNF40O75150 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
RNF40O75150 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
RNF40O75150 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RNF40O75150 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 AC005839.1-201ENST00000624148 3213 ntBASIC8.04□□□□□ -1.12
RNF40O75150 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 PARD3-204ENST00000374768 799 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 RNU4-31P-201ENST00000384211 141 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RNY4P36-201ENST00000391116 96 ntBASIC8.04□□□□□ -1.12
RNF40O75150 KRT18P52-201ENST00000404956 846 ntBASIC8.04□□□□□ -1.12
RNF40O75150 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 RBMY2GP-201ENST00000418671 1034 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RNF40O75150 AJ006995.1-201ENST00000433344 572 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 RBMY2NP-201ENST00000434454 1028 ntBASIC8.04□□□□□ -1.12
RNF40O75150 PPIAP17-201ENST00000438507 471 ntBASIC8.04□□□□□ -1.12
RNF40O75150 FO393419.1-201ENST00000443746 355 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC8.04□□□□□ -1.12
RNF40O75150 AC022730.2-201ENST00000465359 452 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC021074.2-201ENST00000468434 172 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RN7SL145P-201ENST00000469955 296 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RN7SL549P-201ENST00000478997 282 ntBASIC8.04□□□□□ -1.12
RNF40O75150 CEACAMP3-202ENST00000483806 638 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RN7SL182P-201ENST00000496499 300 ntBASIC8.04□□□□□ -1.12
RNF40O75150 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 AC006070.1-201ENST00000508151 193 ntBASIC8.04□□□□□ -1.12
RNF40O75150 NR1I3-233ENST00000515452 1093 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 RNA5SP401-201ENST00000515920 127 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RNU6-559P-201ENST00000516151 98 ntBASIC8.04□□□□□ -1.12
RNF40O75150 SNORA25.17-201ENST00000517184 124 ntBASIC8.04□□□□□ -1.12
RNF40O75150 RN7SKP256-201ENST00000517201 314 ntBASIC8.04□□□□□ -1.12
RNF40O75150 IGLVIV-59-201ENST00000520218 250 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC8.04□□□□□ -1.12
RNF40O75150 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RNF40O75150 RN7SL689P-201ENST00000577215 297 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 UBE2L4-201ENST00000587688 464 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC8.04□□□□□ -1.12
RNF40O75150 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.04□□□□□ -1.12
RNF40O75150 FXYD6P1-201ENST00000604857 285 ntBASIC8.04□□□□□ -1.12
RNF40O75150 AC084781.2-201ENST00000615568 161 ntBASIC8.04□□□□□ -1.12
RNF40O75150 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
RNF40O75150 POC1B-AS1-201ENST00000605233 8041 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
RNF40O75150 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 ZNF226-213ENST00000588883 5972 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC8.04□□□□□ -1.12
RNF40O75150 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
RNF40O75150 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF40O75150 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RNF40O75150 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
RNF40O75150 AC093297.3-201ENST00000607056 2517 ntBASIC8.03□□□□□ -1.12
RNF40O75150 AC022784.6-204ENST00000520390 3442 ntTSL 2 BASIC8.03□□□□□ -1.12
RNF40O75150 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
RNF40O75150 SMG1P1-202ENST00000309865 4223 ntBASIC8.03□□□□□ -1.12
RNF40O75150 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
RNF40O75150 AL133320.1-201ENST00000621423 2352 ntBASIC8.03□□□□□ -1.12
RNF40O75150 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF40O75150 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
RNF40O75150 RPL7P26-201ENST00000333817 754 ntBASIC8.03□□□□□ -1.12
RNF40O75150 RN7SKP6-201ENST00000364795 319 ntBASIC8.03□□□□□ -1.12
RNF40O75150 RNA5SP442-201ENST00000365050 107 ntBASIC8.03□□□□□ -1.12
RNF40O75150 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC8.03□□□□□ -1.12
RNF40O75150 AC245036.1-201ENST00000391727 309 ntBASIC8.03□□□□□ -1.12
RNF40O75150 ISY1-202ENST00000393292 988 ntTSL 5 BASIC8.03□□□□□ -1.12
RNF40O75150 HMGB3P1-201ENST00000393368 573 ntBASIC8.03□□□□□ -1.12
RNF40O75150 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC8.03□□□□□ -1.12
RNF40O75150 NDUFB4P5-201ENST00000415445 361 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms