Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RNA5SP335-201ENST00000363817 110 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RNU1-146P-201ENST00000364015 165 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RNA5SP510-201ENST00000364697 99 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AL034403.1-201ENST00000399414 885 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RNU4-74P-201ENST00000411280 161 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RPA2P2-201ENST00000419698 796 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 PTP4A1P7-201ENST00000423476 514 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC115285.1-201ENST00000424879 736 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 USP12PY-201ENST00000427677 1064 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 CLUHP1-201ENST00000435012 1190 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RPL23AP19-201ENST00000436229 369 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC239798.3-201ENST00000454459 408 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC094085.1-201ENST00000468914 584 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 EIF3LP3-201ENST00000495197 822 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 ENPP7P11-201ENST00000505915 627 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 RN7SKP34-201ENST00000516142 244 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MTCYBP19-201ENST00000517463 1124 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC118942.1-201ENST00000529674 1035 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AP000916.1-201ENST00000533869 835 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC008126.1-201ENST00000549019 480 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC023825.1-201ENST00000566704 1030 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC008814.1-201ENST00000603797 406 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC018628.1-201ENST00000624147 3819 ntBASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
TCRBV7S3A2A0A539 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC009135.2-201ENST00000624136 1768 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 MFSD8-213ENST00000641134 1327 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC005294.1-201ENST00000355509 281 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 RN7SKP153-201ENST00000365026 316 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 MTCO2P23-201ENST00000425216 680 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC092447.2-201ENST00000435487 669 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 HMGN1P36-201ENST00000446623 298 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC098826.2-201ENST00000452011 651 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 DUXAP8-207ENST00000456786 622 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 HMGB1P38-201ENST00000490557 577 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC022133.1-201ENST00000490961 571 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC090568.1-201ENST00000509499 856 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC112191.2-201ENST00000522428 333 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 CIR1P1-201ENST00000524055 1133 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC015720.2-201ENST00000567709 334 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC127024.5-201ENST00000580085 462 ntBASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.35□□□□□ -1.55
TCRBV7S3A2A0A539 AC002069.2-201ENST00000603580 883 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms