Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 SELENOWP1-201ENST00000322792 252 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 RPL7P58-201ENST00000402913 758 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 SDHDP6-201ENST00000414693 480 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 RPS4XP5-201ENST00000419038 768 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 USP24P1-201ENST00000433802 779 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 MTCO1P52-201ENST00000433928 531 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 KRT8P51-201ENST00000438938 274 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC026348.1-201ENST00000462549 1053 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 RN7SL515P-201ENST00000463999 297 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 PSAT1P4-201ENST00000466500 526 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 RN7SL269P-201ENST00000467795 305 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC006539.1-201ENST00000481419 501 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 EIF3LP3-201ENST00000495197 822 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC074087.1-201ENST00000512059 724 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 MTCO2P15-201ENST00000532655 656 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC090424.1-201ENST00000535243 736 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 CYP2C60P-201ENST00000566088 139 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AGGF1P6-201ENST00000569213 976 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 MTND4LP24-201ENST00000572277 291 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 MIR4433B-201ENST00000581329 102 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 SS18L2P2-201ENST00000583960 235 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC015802.2-201ENST00000589690 189 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 VN1R78P-201ENST00000597393 564 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC021171.1-201ENST00000603137 706 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC013444.2-201ENST00000603317 787 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC145423.1-201ENST00000605712 336 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL139099.4-201ENST00000614802 114 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC078883.4-201ENST00000623218 367 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AL390318.1-201ENST00000624564 687 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 BX649567.1-201ENST00000642071 1134 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 OR13C1P-202ENST00000641378 2919 ntBASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PCDHB1Q9Y5F3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RNU6-532P-201ENST00000384318 107 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 MIR143-201ENST00000385300 106 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL035419.1-201ENST00000397037 564 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL034374.1-201ENST00000406329 351 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RPS3AP2-201ENST00000407190 754 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 TCEA1P4-201ENST00000415066 844 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC092651.1-201ENST00000426110 312 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC096775.1-201ENST00000437724 448 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AC092647.3-201ENST00000443044 633 ntBASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.85□□□□□ -1.47
PCDHB1Q9Y5F3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms