Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 RPL23AP53-201ENST00000521854 457 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RAB30-209ENST00000532548 644 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 YWHABP2-201ENST00000540201 713 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC087888.1-201ENST00000550884 1254 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 CYCSP38-201ENST00000559840 322 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AC118658.2-201ENST00000618697 459 ntBASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
KCNIP3Q9Y2W7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AL133243.3-201ENST00000617415 3004 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 YES1P1-201ENST00000418510 1628 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 RN7SKP257-201ENST00000364525 309 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SUGT1P2-201ENST00000379452 992 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ST13P16-201ENST00000401760 781 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 HMGB1P20-201ENST00000402555 677 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SRSF1P1-201ENST00000424058 520 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC127526.2-201ENST00000426436 775 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ARL5AP3-201ENST00000439327 386 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AMYP1-201ENST00000440059 1023 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 XKRYP6-201ENST00000440468 1116 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 XKRYP3-201ENST00000442113 1116 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 RNU6-551P-201ENST00000516661 103 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC022826.1-201ENST00000519383 805 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC116917.1-201ENST00000520558 305 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC078878.1-201ENST00000539832 958 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC009268.1-201ENST00000561352 1203 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 RPL26P30-202ENST00000602923 645 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC022001.1-201ENST00000605193 268 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC092159.4-201ENST00000624944 550 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC111152.1-202ENST00000635848 339 ntBASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
KCNIP3Q9Y2W7 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AC007382.1-201ENST00000624376 2618 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RNA5SP28-201ENST00000363841 119 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 RNA5SP394-201ENST00000364216 119 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 AL512430.2-201ENST00000406786 339 ntBASIC4.28□□□□□ -1.72
KCNIP3Q9Y2W7 DHFRP5-201ENST00000406944 564 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms