Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 RPL7P14-201ENST00000449851 741 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 SRP68P2-201ENST00000456184 254 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC110749.1-201ENST00000462007 357 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 RN7SL221P-201ENST00000466190 281 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 RN7SL647P-201ENST00000485429 300 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC122718.2-201ENST00000505325 591 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 HMGB1P44-201ENST00000508597 572 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC104108.1-201ENST00000509930 412 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC008429.4-201ENST00000521201 182 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 PPIAP6-201ENST00000557078 499 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 NDUFA3P1-201ENST00000588007 252 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC125494.2-201ENST00000602431 657 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 SEPT7P9-203ENST00000604116 343 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC104458.1-201ENST00000608243 463 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 U1.41-201ENST00000617626 165 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC073348.1-201ENST00000623002 331 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.48□□□□□ -1.37
SSU72Q9NP77 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.48□□□□□ -1.37
SSU72Q9NP77 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SSU72Q9NP77 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AL133243.2-201ENST00000610331 1621 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 MTCO1P6-201ENST00000481192 1384 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ZNF761-202ENST00000432094 4061 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SSU72Q9NP77 GNG5P2-201ENST00000372054 207 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC003045.1-201ENST00000398779 713 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC109638.1-201ENST00000417406 326 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 VN1R20P-201ENST00000425215 966 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 PRPS1P2-201ENST00000430496 937 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 VDAC2P3-201ENST00000430995 828 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AL365184.2-201ENST00000431139 435 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 NIP7P1-201ENST00000433227 512 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC093716.1-201ENST00000435923 377 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC009518.3-201ENST00000438972 253 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 HMGN1P32-201ENST00000441744 256 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 RPL23AP35-201ENST00000451906 501 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC091133.4-201ENST00000511142 308 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 RPL7L1P4-201ENST00000513004 707 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AC046134.1-201ENST00000514454 666 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 IGKV2-19-201ENST00000518132 283 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.47□□□□□ -1.37
SSU72Q9NP77 IGKV1D-22-201ENST00000518953 324 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.47□□□□□ -1.37
SSU72Q9NP77 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms