Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 NIFKP7-201ENST00000503365 834 ntBASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 AL049830.4-201ENST00000555149 351 ntBASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 AC234771.5-201ENST00000600161 514 ntBASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 AP001521.2-201ENST00000608772 546 ntBASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 AC087821.1-201ENST00000623639 567 ntBASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.4□□□□□ -1.71
KIAA1549Q9HCM3 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC068870.3-201ENST00000625077 2536 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 MIR192-201ENST00000384915 110 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 RN7SL319P-201ENST00000480656 221 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC016573.1-201ENST00000523205 539 ntTSL 3 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AL110118.1-201ENST00000553543 400 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AGGF1P9-201ENST00000561884 913 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC010424.2-201ENST00000607594 443 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AP000346.3-201ENST00000622821 210 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
KIAA1549Q9HCM3 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 LRRC37BP1-201ENST00000398851 714 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC026782.2-201ENST00000510845 636 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC108043.1-201ENST00000512696 574 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MIR3667-201ENST00000581025 74 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MIR4737-201ENST00000583979 81 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AL583832.1-201ENST00000603227 784 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC016590.3-201ENST00000611171 753 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MIR6780A-201ENST00000615089 68 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AL591135.1-201ENST00000401578 5914 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 SMG1P6-201ENST00000532337 2930 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 CASC19-206ENST00000641028 1430 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC136624.1-201ENST00000400791 413 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AL049697.2-201ENST00000403708 294 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AP000580.1-201ENST00000404439 358 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 VN1R37P-201ENST00000419096 748 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 GLUD1P9-201ENST00000420997 1173 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 VTI1BP4-201ENST00000427516 527 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AF230666.2-201ENST00000602328 725 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AC008833.1-201ENST00000611633 691 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 TLK1P1-201ENST00000456760 2440 ntBASIC4.38□□□□□ -1.71
KIAA1549Q9HCM3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 AL360270.2-201ENST00000562952 5985 ntBASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
KIAA1549Q9HCM3 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms