Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RNU1-49P-201ENST00000363468 159 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 MIR433-201ENST00000384837 93 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-920P-201ENST00000410926 92 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RN7SKP108-201ENST00000411367 328 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 PAICSP7-201ENST00000419829 962 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC130360.1-201ENST00000425489 1117 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RPS7P14-201ENST00000426405 583 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 MRPS21P3-201ENST00000436696 262 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC092967.1-201ENST00000449016 481 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RPL21P134-201ENST00000453468 483 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 GAPDHP36-201ENST00000480688 918 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC069304.1-201ENST00000491593 704 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OR7E157P-201ENST00000494376 911 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 HMGB3P13-201ENST00000511263 607 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OR5H7P-201ENST00000514084 930 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 PRMT5P1-201ENST00000514351 598 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 CR383658.1-201ENST00000514609 734 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC130365.2-201ENST00000525882 1201 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AP003080.1-202ENST00000526526 915 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC005363.1-201ENST00000530779 351 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC036111.2-201ENST00000533247 901 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC011260.1-201ENST00000578420 472 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC068790.7-201ENST00000602347 528 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL080312.2-201ENST00000613001 630 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC121761.2-201ENST00000617300 689 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL590240.3-201ENST00000621416 943 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC024023.1-201ENST00000624530 922 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 GUCY1B2-204ENST00000531898 1979 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AL137058.3-201ENST00000624531 3099 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 OFD1P17-201ENST00000437639 3018 ntBASIC6.07□□□□□ -1.44
TRIM48Q8IWZ4 AC024651.2-201ENST00000562480 2098 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AC119674.1-213ENST00000641177 1386 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 MTND5P24-201ENST00000438892 1767 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AP005901.5-201ENST00000545779 1796 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 STAG3L4-201ENST00000352103 530 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 Y_RNA.3-201ENST00000362331 103 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-543P-201ENST00000362576 108 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RNU6-560P-201ENST00000364007 108 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 AL132875.1-201ENST00000403623 949 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 RN7SKP240-201ENST00000410583 375 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 VTA1P1-201ENST00000414044 866 ntBASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.06□□□□□ -1.44
TRIM48Q8IWZ4 ELOCP17-201ENST00000414751 326 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms