Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 AL158053.1-201ENST00000441503 453 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AL596266.1-201ENST00000448132 400 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 CALM1P2-201ENST00000452941 448 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 HNRNPDLP3-201ENST00000456745 380 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 RPS7P6-201ENST00000485777 579 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC139697.1-201ENST00000548429 745 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 MIR4697-201ENST00000582977 78 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC015911.5-201ENST00000587076 451 ntBASIC5.89□□□□□ -1.47
HERC6Q8IVU3 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HERC6Q8IVU3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC026951.1-201ENST00000559530 2459 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 MT-TP-201ENST00000387461 68 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC013442.1-201ENST00000397347 228 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 OR4K12P-201ENST00000406538 961 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RNA5SP487-201ENST00000410186 122 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RPL23AP4-201ENST00000427757 463 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 KRT8P51-201ENST00000438938 274 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AL672138.1-201ENST00000450604 1015 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC108751.3-201ENST00000461814 1020 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC009127.1-201ENST00000467090 155 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RN7SL346P-201ENST00000491561 294 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RPS4XP20-201ENST00000505751 772 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 ST13P12-201ENST00000508958 1094 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 HMGN1P15-201ENST00000513870 295 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AL671862.1-201ENST00000515851 349 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 OR4A17P-201ENST00000526032 904 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC024940.3-201ENST00000538551 316 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AL163051.2-201ENST00000618976 735 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AP000943.4-201ENST00000622912 357 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AC099494.2-201ENST00000623371 978 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HERC6Q8IVU3 AL442128.2-201ENST00000620246 1824 ntBASIC5.88□□□□□ -1.47
HERC6Q8IVU3 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 INTS6P1-201ENST00000504674 2530 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 OR6K4P-201ENST00000423179 955 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 USP9YP9-201ENST00000429406 715 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 NDUFA5P10-201ENST00000432147 357 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.87□□□□□ -1.47
HERC6Q8IVU3 MOB1AP2-201ENST00000446060 614 ntBASIC5.87□□□□□ -1.47
HERC6Q8IVU3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms