Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 MTND2P2-201ENST00000434633 945 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC006335.2-201ENST00000437993 330 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 TPTE2P3-201ENST00000441562 1189 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC097499.1-201ENST00000444277 208 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 RNU6-599P-201ENST00000459383 107 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 RNU6-1193P-201ENST00000459461 107 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC021205.1-201ENST00000468797 348 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 RN7SL583P-201ENST00000475692 287 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 RN7SL214P-201ENST00000487317 265 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.82□□□□□ -1.64
EFNB3Q15768 DUTP1-201ENST00000493631 470 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 ST13P12-201ENST00000508958 1094 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 BX510359.5-201ENST00000515651 304 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AC091163.3-201ENST00000518269 1144 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EFNB3Q15768 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EFNB3Q15768 AP001207.2-201ENST00000519490 539 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.82□□□□□ -1.64
EFNB3Q15768 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AL109741.3-201ENST00000561748 592 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 MRPS21P7-201ENST00000566937 238 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.82□□□□□ -1.64
EFNB3Q15768 AP001160.4-201ENST00000596971 382 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AL133481.2-203ENST00000607558 139 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC140725.3-201ENST00000616193 880 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AP004607.9-201ENST00000618202 316 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC022079.2-201ENST00000619739 566 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 RNU6-368P-201ENST00000620928 107 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 RNU6-538P-201ENST00000622329 107 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.82□□□□□ -1.64
EFNB3Q15768 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC4.82□□□□□ -1.64
EFNB3Q15768 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
EFNB3Q15768 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EFNB3Q15768 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
EFNB3Q15768 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EFNB3Q15768 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
EFNB3Q15768 SAMMSON-213ENST00000641336 1521 ntBASIC4.82□□□□□ -1.64
EFNB3Q15768 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
EFNB3Q15768 MTCO1P18-201ENST00000455518 1419 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 AC027228.2-201ENST00000567141 2154 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
EFNB3Q15768 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
EFNB3Q15768 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 RNA5SP319-201ENST00000362768 119 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 RNA5SP91-201ENST00000390902 119 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 PEX12P1-201ENST00000400284 1048 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 RN7SKP279-201ENST00000411383 298 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 RPS6P23-201ENST00000413224 722 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 MTATP6P20-201ENST00000414147 562 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC01347-201ENST00000417964 355 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AC023128.2-201ENST00000420880 1223 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.81□□□□□ -1.64
EFNB3Q15768 ELOCP11-201ENST00000436690 332 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 YWHAZP2-201ENST00000440317 728 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.81□□□□□ -1.64
EFNB3Q15768 ELOCP16-201ENST00000444494 332 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 NDUFAF4P2-201ENST00000445374 520 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 RBMY2TP-201ENST00000451162 947 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 PSMC1P13-201ENST00000458195 985 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AL133445.1-201ENST00000467051 452 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 EIF3LP3-201ENST00000495197 822 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.81□□□□□ -1.64
EFNB3Q15768 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
EFNB3Q15768 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.81□□□□□ -1.64
EFNB3Q15768 SNORA19.3-201ENST00000516165 130 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 RN7SKP265-201ENST00000516448 223 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 Y_RNA.717-201ENST00000517106 92 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 HIGD1AP18-201ENST00000520730 278 ntBASIC4.81□□□□□ -1.64
EFNB3Q15768 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.81□□□□□ -1.64
EFNB3Q15768 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.81□□□□□ -1.64
EFNB3Q15768 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms