Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC243654.2-201ENST00000612843 443 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC244100.4-201ENST00000617747 388 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC020923.1-201ENST00000624021 917 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN1BQ07699 OR2L1P-202ENST00000641567 1023 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC235565.1-201ENST00000456962 1325 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 PDZK1P1-202ENST00000425209 1350 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.85□□□□□ -1.63
SCN1BQ07699 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 RNF6P1-201ENST00000444889 1784 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 AC100757.1-201ENST00000616872 1835 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCN1BQ07699 PHKBP1-201ENST00000450951 1951 ntBASIC4.85□□□□□ -1.63
SCN1BQ07699 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.85□□□□□ -1.63
SCN1BQ07699 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC4.85□□□□□ -1.63
SCN1BQ07699 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCN1BQ07699 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 RNU6-252P-201ENST00000363232 107 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 RNA5SP223-201ENST00000365174 120 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 UBBP2-201ENST00000376781 231 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC009965.2-201ENST00000425328 970 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 KCTD9P1-201ENST00000430462 1167 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC007679.3-201ENST00000434035 414 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 ACA64.1-201ENST00000459171 127 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 APOOP2-201ENST00000461561 539 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 PPIAP21-201ENST00000464473 501 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 AC104687.1-201ENST00000485829 412 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 RN7SL193P-201ENST00000491708 276 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 RPL23AP73-201ENST00000492507 471 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 AC010468.3-201ENST00000508225 458 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 SMARCE1P4-201ENST00000523647 241 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 CIR1P1-201ENST00000524055 1133 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN1BQ07699 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.84□□□□□ -1.63
SCN1BQ07699 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC091078.2-201ENST00000557145 559 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AC108738.1-201ENST00000603703 237 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 MIR6889-201ENST00000613185 59 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AL356094.1-201ENST00000624663 1212 ntBASIC4.84□□□□□ -1.63
SCN1BQ07699 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
SCN1BQ07699 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.84□□□□□ -1.63
SCN1BQ07699 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
SCN1BQ07699 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.84□□□□□ -1.64
SCN1BQ07699 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 AC090971.4-201ENST00000560291 1800 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCN1BQ07699 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCN1BQ07699 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.83□□□□□ -1.64
SCN1BQ07699 RNU6-146P-201ENST00000384602 108 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCN1BQ07699 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SCN1BQ07699 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
SCN1BQ07699 TATDN1P1-201ENST00000414123 891 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.83□□□□□ -1.64
SCN1BQ07699 RPL12P34-201ENST00000424532 479 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCN1BQ07699 RPL12P28-201ENST00000430852 489 ntBASIC4.83□□□□□ -1.64
SCN1BQ07699 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.83□□□□□ -1.64
SCN1BQ07699 RPS24P8-201ENST00000431490 402 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 201.7 ms