Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HIST1H1AQ02539 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AC107068.1-201ENST00000563286 4218 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RNA5SP28-201ENST00000363841 119 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RNA5SP146-201ENST00000410743 123 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 EIF4A1P3-201ENST00000411521 244 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CYCSP12-201ENST00000437729 300 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 EIF4A1P6-201ENST00000448133 1210 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 GYG1P1-201ENST00000460864 698 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AC098583.1-201ENST00000480875 255 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 MTATP6P1-201ENST00000514057 681 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RNU6-941P-201ENST00000516346 108 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RNF138P2-201ENST00000603490 592 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AC004477.3-201ENST00000614061 590 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 WBP1LP8-201ENST00000617401 327 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AL023881.1-201ENST00000621088 301 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 MTCO1P1-201ENST00000624263 1081 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
HIST1H1AQ02539 SMG1P6-201ENST00000532337 2930 ntBASIC3.88□□□□□ -1.79
HIST1H1AQ02539 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC007382.1-201ENST00000624376 2618 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 SALL4P2-201ENST00000423288 2910 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RNA5SP90-201ENST00000364801 99 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC019155.1-201ENST00000382242 574 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 SNORA67-201ENST00000384423 137 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RNA5SP339-201ENST00000390987 122 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC009804.1-201ENST00000400949 179 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RN7SKP16-201ENST00000410180 299 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AL390774.1-201ENST00000411924 246 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AL513325.1-201ENST00000417716 1034 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 E2F6P2-201ENST00000420708 748 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 COX6CP13-201ENST00000428703 226 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 GAPDHP34-201ENST00000432112 823 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 ARL4AP3-201ENST00000441452 574 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AP000281.1-201ENST00000444036 316 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC007386.1-201ENST00000455212 582 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC104849.1-201ENST00000462623 405 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RPL5P30-201ENST00000465511 891 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RPSAP39-201ENST00000467439 883 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RN7SL809P-201ENST00000482040 297 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 GTF2F2P1-201ENST00000511083 675 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC021146.3-201ENST00000511911 260 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 MTCYBP19-201ENST00000517463 1124 ntBASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
HIST1H1AQ02539 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms