Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.12□□□□□ -1.59
CBX1P83916 RNA5SP232-201ENST00000364144 119 ntBASIC5.12□□□□□ -1.59
CBX1P83916 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.12□□□□□ -1.59
CBX1P83916 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.12□□□□□ -1.59
CBX1P83916 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.12□□□□□ -1.59
CBX1P83916 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 LINC00993-201ENST00000420453 540 ntBASIC5.12□□□□□ -1.59
CBX1P83916 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.12□□□□□ -1.59
CBX1P83916 TXNP5-201ENST00000441043 315 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AL161636.2-201ENST00000445179 927 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AC007383.1-201ENST00000445875 636 ntBASIC5.12□□□□□ -1.59
CBX1P83916 EEF1B2P3-201ENST00000447718 678 ntBASIC5.12□□□□□ -1.59
CBX1P83916 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 AC098847.1-201ENST00000473094 348 ntBASIC5.12□□□□□ -1.59
CBX1P83916 RN7SL558P-201ENST00000497468 299 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AC097173.1-201ENST00000505862 819 ntBASIC5.12□□□□□ -1.59
CBX1P83916 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.12□□□□□ -1.59
CBX1P83916 CCNHP1-201ENST00000513311 678 ntBASIC5.12□□□□□ -1.59
CBX1P83916 PRMT5P1-201ENST00000514351 598 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 WBP1LP3-201ENST00000523033 208 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.12□□□□□ -1.59
CBX1P83916 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.12□□□□□ -1.59
CBX1P83916 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.12□□□□□ -1.59
CBX1P83916 AC005377.1-201ENST00000605126 456 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AL031601.1-201ENST00000605702 394 ntBASIC5.12□□□□□ -1.59
CBX1P83916 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.12□□□□□ -1.59
CBX1P83916 AC074276.2-201ENST00000619891 348 ntBASIC5.12□□□□□ -1.59
CBX1P83916 AL357140.4-201ENST00000636827 412 ntBASIC5.12□□□□□ -1.59
CBX1P83916 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CBX1P83916 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CBX1P83916 MRE11P1-201ENST00000464884 2127 ntBASIC5.12□□□□□ -1.59
CBX1P83916 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CBX1P83916 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CBX1P83916 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CBX1P83916 AC107021.2-201ENST00000567714 2095 ntBASIC5.11□□□□□ -1.59
CBX1P83916 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 RNA5SP500-201ENST00000364486 119 ntBASIC5.11□□□□□ -1.59
CBX1P83916 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 AL133260.1-201ENST00000405720 405 ntBASIC5.11□□□□□ -1.59
CBX1P83916 CLNS1AP1-201ENST00000435954 682 ntBASIC5.11□□□□□ -1.59
CBX1P83916 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CBX1P83916 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.11□□□□□ -1.59
CBX1P83916 HLA-DPA3-207ENST00000454398 229 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 RN7SL254P-201ENST00000460609 284 ntBASIC5.11□□□□□ -1.59
CBX1P83916 RPS26P39-201ENST00000469206 341 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.11□□□□□ -1.59
CBX1P83916 AC025445.1-201ENST00000502728 300 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AC112484.3-201ENST00000505910 329 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 AP003033.2-201ENST00000528901 805 ntBASIC5.11□□□□□ -1.59
CBX1P83916 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 AC138207.8-204ENST00000579588 527 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.11□□□□□ -1.59
CBX1P83916 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 AC005520.3-201ENST00000602874 370 ntBASIC5.11□□□□□ -1.59
CBX1P83916 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CBX1P83916 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CBX1P83916 KARSP3-201ENST00000571212 1504 ntBASIC5.11□□□□□ -1.59
CBX1P83916 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.11□□□□□ -1.59
CBX1P83916 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CBX1P83916 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.1□□□□□ -1.59
CBX1P83916 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CBX1P83916 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CBX1P83916 RN7SKP250-201ENST00000363924 321 ntBASIC5.1□□□□□ -1.59
CBX1P83916 RN7SKP6-201ENST00000364795 319 ntBASIC5.1□□□□□ -1.59
CBX1P83916 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.1□□□□□ -1.59
CBX1P83916 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CBX1P83916 HSPA8P15-201ENST00000401676 786 ntBASIC5.1□□□□□ -1.59
CBX1P83916 AL080315.1-201ENST00000406055 466 ntBASIC5.1□□□□□ -1.59
CBX1P83916 U3.35-201ENST00000408405 208 ntBASIC5.1□□□□□ -1.59
CBX1P83916 VDAC1P9-201ENST00000412766 841 ntBASIC5.1□□□□□ -1.59
CBX1P83916 AC073136.2-201ENST00000417282 849 ntBASIC5.1□□□□□ -1.59
CBX1P83916 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CBX1P83916 BX119904.1-201ENST00000432026 348 ntBASIC5.1□□□□□ -1.59
CBX1P83916 OR6D1P-201ENST00000436165 939 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms