Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
CCNA1P78396 MTCO1P46-201ENST00000451639 1491 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.77□□□□□ -1.49
CCNA1P78396 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.77□□□□□ -1.49
CCNA1P78396 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCNA1P78396 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 RNU6-673P-201ENST00000365084 104 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 AL136116.2-201ENST00000404020 785 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC016712.1-201ENST00000431088 378 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 TCEA1P1-201ENST00000449716 880 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 RN7SL814P-201ENST00000487715 300 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.77□□□□□ -1.49
CCNA1P78396 PRELID3BP5-201ENST00000508612 460 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 HPRT1P1-201ENST00000509498 657 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.77□□□□□ -1.49
CCNA1P78396 TVP23CP2-201ENST00000571473 623 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 MIR4284-201ENST00000578924 81 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 AC209154.1-201ENST00000582156 337 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.77□□□□□ -1.49
CCNA1P78396 AC005377.1-201ENST00000605126 456 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 MIR7703-201ENST00000620784 77 ntBASIC5.77□□□□□ -1.49
CCNA1P78396 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.77□□□□□ -1.49
CCNA1P78396 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.77□□□□□ -1.49
CCNA1P78396 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCNA1P78396 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCNA1P78396 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.76□□□□□ -1.49
CCNA1P78396 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 CASC19-260ENST00000641828 2001 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 AL355488.2-201ENST00000609909 2850 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 RN7SKP185-201ENST00000362813 326 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 SNORA2.3-201ENST00000383920 135 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCNA1P78396 RPS3AP23-201ENST00000401762 784 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 AC009480.2-201ENST00000422916 432 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 AC009238.2-201ENST00000431026 355 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 BX323845.1-201ENST00000432417 179 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 AL359265.2-201ENST00000434367 631 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC114982.2-201ENST00000461396 358 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNA1P78396 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNA1P78396 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCNA1P78396 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 AC010266.2-201ENST00000564741 3255 ntBASIC5.76□□□□□ -1.49
CCNA1P78396 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCNA1P78396 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNA1P78396 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.75□□□□□ -1.49
CCNA1P78396 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNA1P78396 A2MP1-204ENST00000566278 4130 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.75□□□□□ -1.49
CCNA1P78396 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNA1P78396 RNA5SP191-201ENST00000362585 102 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 GLULP6-201ENST00000399502 913 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNA1P78396 AC093414.1-201ENST00000434712 514 ntBASIC5.75□□□□□ -1.49
CCNA1P78396 GSTA7P-201ENST00000438425 448 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms