Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.62□□□□□ -1.83
CKS1BP61024 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.62□□□□□ -1.83
CKS1BP61024 IRF5P1-201ENST00000504852 2164 ntBASIC3.62□□□□□ -1.83
CKS1BP61024 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CKS1BP61024 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CKS1BP61024 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 AC106871.1-201ENST00000568324 3102 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CKS1BP61024 XIAPP3-201ENST00000312918 795 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CKS1BP61024 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
CKS1BP61024 RNU6-146P-201ENST00000384602 108 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 HDGFP1-201ENST00000405943 252 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 LSM5-203ENST00000409782 649 ntTSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 RNA5SP104-201ENST00000410989 118 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 RPL12P9-201ENST00000412942 488 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 OR2AT2P-201ENST00000413438 905 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AL354890.1-201ENST00000413730 346 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AL391219.1-201ENST00000422570 483 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 GAPDHP58-201ENST00000438477 1006 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AMYP1-201ENST00000440059 1023 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AL450996.1-201ENST00000445574 1202 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 TIMM8BP2-201ENST00000445940 251 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 EEF1B2P3-201ENST00000447718 678 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 RPL21P71-201ENST00000465598 459 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.61□□□□□ -1.83
CKS1BP61024 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 LSM3P4-201ENST00000502948 309 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC109481.1-201ENST00000509173 282 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 MTND6P2-201ENST00000512226 524 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 RNU6-941P-201ENST00000516346 108 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 IGKV3D-25-201ENST00000519599 235 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC116917.1-201ENST00000520558 305 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 BTG1P1-201ENST00000540396 508 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 HSPE1P2-201ENST00000554777 306 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 OR1E3-201ENST00000575608 948 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC008638.3-201ENST00000603341 463 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC123786.2-201ENST00000603459 275 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 AC244107.2-201ENST00000611773 76 ntBASIC3.61□□□□□ -1.83
CKS1BP61024 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.61□□□□□ -1.83
CKS1BP61024 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CKS1BP61024 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CKS1BP61024 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CKS1BP61024 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CKS1BP61024 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC3.6□□□□□ -1.83
CKS1BP61024 IQCB2P-201ENST00000401788 1633 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 OR9G4-201ENST00000302957 984 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 SNORA64.1-201ENST00000362600 132 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 RNA5SP500-201ENST00000364486 119 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 RNU4-2-201ENST00000365668 141 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC3.6□□□□□ -1.83
CKS1BP61024 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CKS1BP61024 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CKS1BP61024 OR7E101P-201ENST00000400428 513 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.6□□□□□ -1.83
CKS1BP61024 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC3.6□□□□□ -1.83
CKS1BP61024 NDUFS5P5-201ENST00000437256 321 ntBASIC3.6□□□□□ -1.83
CKS1BP61024 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC3.6□□□□□ -1.83
CKS1BP61024 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms