Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT20P35900 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT20P35900 AC021678.3-201ENST00000517893 476 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.3□□□□□ -1.56
KRT20P35900 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT20P35900 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT20P35900 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.3□□□□□ -1.56
KRT20P35900 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT20P35900 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.3□□□□□ -1.56
KRT20P35900 MIR4716-201ENST00000579628 84 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.3□□□□□ -1.56
KRT20P35900 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT20P35900 AL671309.1-201ENST00000603750 544 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AC018618.2-201ENST00000604770 446 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AL355816.1-201ENST00000607951 118 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AP001962.1-201ENST00000624114 559 ntBASIC5.3□□□□□ -1.56
KRT20P35900 AC021766.1-201ENST00000624404 741 ntBASIC5.3□□□□□ -1.56
KRT20P35900 FRG1DP-201ENST00000635586 771 ntBASIC5.3□□□□□ -1.56
KRT20P35900 MIR1910-201ENST00000636955 80 ntBASIC5.3□□□□□ -1.56
KRT20P35900 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 AC112198.2-201ENST00000426589 6996 ntBASIC5.3□□□□□ -1.56
KRT20P35900 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.3□□□□□ -1.56
KRT20P35900 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.3□□□□□ -1.56
KRT20P35900 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
KRT20P35900 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 MTND4P31-201ENST00000425607 1343 ntBASIC5.29□□□□□ -1.56
KRT20P35900 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
KRT20P35900 AP000357.1-201ENST00000409926 1165 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AL133482.1-201ENST00000415988 498 ntBASIC5.29□□□□□ -1.56
KRT20P35900 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 NIFKP3-201ENST00000417799 865 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT20P35900 AL358176.3-201ENST00000420757 454 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 AKR1B10P1-201ENST00000425765 942 ntBASIC5.29□□□□□ -1.56
KRT20P35900 MTND6P12-201ENST00000428247 522 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC073069.1-201ENST00000428657 441 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC073508.1-201ENST00000428866 656 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC023141.6-201ENST00000429418 337 ntBASIC5.29□□□□□ -1.56
KRT20P35900 TMEM183AP1-205ENST00000432739 290 ntBASIC5.29□□□□□ -1.56
KRT20P35900 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 HMGB3P24-201ENST00000433260 622 ntBASIC5.29□□□□□ -1.56
KRT20P35900 TMX2P1-201ENST00000436507 708 ntBASIC5.29□□□□□ -1.56
KRT20P35900 MTND2P8-201ENST00000450555 1025 ntBASIC5.29□□□□□ -1.56
KRT20P35900 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT20P35900 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT20P35900 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
KRT20P35900 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.29□□□□□ -1.56
KRT20P35900 SNORA76.2-201ENST00000517095 137 ntBASIC5.29□□□□□ -1.56
KRT20P35900 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 AC139365.2-201ENST00000517972 253 ntBASIC5.29□□□□□ -1.56
KRT20P35900 CIR1P1-201ENST00000524055 1133 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.29□□□□□ -1.56
KRT20P35900 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT20P35900 AC084757.1-201ENST00000559987 490 ntBASIC5.29□□□□□ -1.56
KRT20P35900 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 AC100767.2-201ENST00000604840 693 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.29□□□□□ -1.56
KRT20P35900 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 RNF6P1-201ENST00000444889 1784 ntBASIC5.29□□□□□ -1.56
KRT20P35900 AC104964.3-201ENST00000606115 2860 ntBASIC5.29□□□□□ -1.56
KRT20P35900 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.29□□□□□ -1.56
KRT20P35900 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
KRT20P35900 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT20P35900 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT20P35900 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
KRT20P35900 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms