Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC073610.1-201ENST00000489971 396 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RN7SL612P-201ENST00000497704 295 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 SNX18P24-201ENST00000505249 671 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC112198.1-201ENST00000505369 1220 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC010424.1-201ENST00000506336 297 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC104108.1-201ENST00000509930 412 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC023632.1-201ENST00000518463 375 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC022880.1-201ENST00000534017 973 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 AL121766.1-201ENST00000547436 487 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC6.11□□□□□ -1.43
COL6A2P12110 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC010546.1-201ENST00000569391 485 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 MIR132-201ENST00000591554 101 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AF131215.7-201ENST00000602443 707 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC078795.2-201ENST00000602835 1252 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AL021997.1-201ENST00000605757 193 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 PROS2P-201ENST00000474651 1951 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC022164.1-201ENST00000568767 2673 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.11□□□□□ -1.43
COL6A2P12110 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 CASC19-206ENST00000641028 1430 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.1□□□□□ -1.43
COL6A2P12110 OR6C64P-201ENST00000419708 825 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC124944.2-201ENST00000429866 1242 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 USP9YP31-201ENST00000431405 881 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 HMGN1P32-201ENST00000441744 256 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 GTF3AP5-201ENST00000442645 697 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 POU5F1P5-201ENST00000445059 658 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 WBP1LP4-201ENST00000505043 344 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 OR4D12P-201ENST00000509361 911 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC093664.1-201ENST00000511779 289 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC008837.2-201ENST00000513076 418 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 CR383658.1-201ENST00000514609 734 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 HNRNPKP5-201ENST00000515300 253 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 TPM3P3-201ENST00000521343 354 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL6A2P12110 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
COL6A2P12110 HIGD1AP17-201ENST00000554576 276 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC006530.1-201ENST00000555980 571 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.1□□□□□ -1.43
COL6A2P12110 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC6.1□□□□□ -1.43
COL6A2P12110 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 LSM1P2-201ENST00000604911 322 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AP000238.1-201ENST00000608759 426 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC097505.1-201ENST00000610199 565 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC011472.4-201ENST00000615848 491 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC022306.2-201ENST00000617563 647 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AC005899.6-201ENST00000620729 297 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 MTND5P24-201ENST00000438892 1767 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.1□□□□□ -1.43
COL6A2P12110 AC087359.1-201ENST00000508335 1740 ntBASIC6.1□□□□□ -1.43
COL6A2P12110 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
COL6A2P12110 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 430.7 ms