Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC5.86□□□□□ -1.47
COL1A1P02452 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.86□□□□□ -1.47
COL1A1P02452 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL1A1P02452 SNORA5.1-201ENST00000384275 131 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 AC004690.1-201ENST00000418216 328 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 QRSL1P2-201ENST00000418582 964 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 GLUD1P9-201ENST00000420997 1173 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 AC016831.4-201ENST00000438302 307 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 AC004980.3-201ENST00000447046 365 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.86□□□□□ -1.47
COL1A1P02452 RPS5P7-201ENST00000456664 608 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.86□□□□□ -1.47
COL1A1P02452 AC091868.1-201ENST00000508746 304 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 MIR4675-201ENST00000577898 77 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.86□□□□□ -1.47
COL1A1P02452 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.86□□□□□ -1.47
COL1A1P02452 AC022726.1-201ENST00000587475 207 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 FAM27B-201ENST00000610601 213 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
COL1A1P02452 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL1A1P02452 AC125257.1-201ENST00000560400 2930 ntBASIC5.86□□□□□ -1.47
COL1A1P02452 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL1A1P02452 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL1A1P02452 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
COL1A1P02452 AL442639.1-201ENST00000625030 1899 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL1A1P02452 FAM3C2-201ENST00000312214 681 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL1A1P02452 RN7SKP106-201ENST00000410832 272 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.85□□□□□ -1.47
COL1A1P02452 MRPS21P2-201ENST00000424704 264 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.85□□□□□ -1.47
COL1A1P02452 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.85□□□□□ -1.47
COL1A1P02452 NUTF2P7-201ENST00000453086 375 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 AC104971.1-201ENST00000495117 578 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 AC134698.5-201ENST00000519444 336 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.85□□□□□ -1.47
COL1A1P02452 AP005119.2-201ENST00000579735 1105 ntBASIC5.85□□□□□ -1.47
COL1A1P02452 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.85□□□□□ -1.47
COL1A1P02452 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.85□□□□□ -1.47
COL1A1P02452 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.85□□□□□ -1.47
COL1A1P02452 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
COL1A1P02452 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
COL1A1P02452 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.85□□□□□ -1.47
COL1A1P02452 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
COL1A1P02452 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL1A1P02452 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 RPL21P67-201ENST00000402896 478 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.84□□□□□ -1.47
COL1A1P02452 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.84□□□□□ -1.47
COL1A1P02452 AC007064.3-201ENST00000422608 359 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 RPL23AP1-201ENST00000428990 471 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 AL136455.1-201ENST00000441083 1240 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 AC007537.2-201ENST00000472093 511 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 AL161747.1-201ENST00000480068 358 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 BUD31P1-201ENST00000521828 359 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
COL1A1P02452 AC093249.4-201ENST00000564755 259 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 SS18L2P2-201ENST00000583960 235 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.84□□□□□ -1.47
COL1A1P02452 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.84□□□□□ -1.47
COL1A1P02452 AC091046.3-201ENST00000631455 1574 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.84□□□□□ -1.47
COL1A1P02452 AL449283.1-201ENST00000602631 3403 ntBASIC5.84□□□□□ -1.47
COL1A1P02452 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
COL1A1P02452 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL1A1P02452 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL1A1P02452 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.84□□□□□ -1.47
COL1A1P02452 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
COL1A1P02452 CCAT2-201ENST00000630920 1752 ntBASIC5.84□□□□□ -1.48
COL1A1P02452 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
COL1A1P02452 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
COL1A1P02452 RNU4-25P-201ENST00000410569 230 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 LINC00993-201ENST00000420453 540 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC097523.2-201ENST00000435551 652 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.83□□□□□ -1.48
COL1A1P02452 AC021660.1-201ENST00000465006 554 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 RPL5P12-201ENST00000477071 851 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.83□□□□□ -1.48
COL1A1P02452 RN7SKP21-201ENST00000516503 220 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.83□□□□□ -1.48
COL1A1P02452 AGGF1P9-201ENST00000561884 913 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.83□□□□□ -1.48
COL1A1P02452 MIR4660-201ENST00000583549 74 ntBASIC5.83□□□□□ -1.48
COL1A1P02452 AL139041.1-201ENST00000605480 610 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms