Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PVALB-202ENST00000404171 422 ntTSL 2 BASIC8.5□□□□□ -1.05
CUX2O14529 AC114755.2-201ENST00000413520 361 ntBASIC8.5□□□□□ -1.05
CUX2O14529 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC8.5□□□□□ -1.05
CUX2O14529 RN7SL303P-201ENST00000469773 251 ntBASIC8.5□□□□□ -1.05
CUX2O14529 AC020779.1-201ENST00000478757 796 ntBASIC8.5□□□□□ -1.05
CUX2O14529 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC8.5□□□□□ -1.05
CUX2O14529 AC107016.1-201ENST00000550463 337 ntBASIC8.5□□□□□ -1.05
CUX2O14529 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CUX2O14529 ARF4P1-201ENST00000605447 541 ntBASIC8.5□□□□□ -1.05
CUX2O14529 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC8.5□□□□□ -1.05
CUX2O14529 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC8.5□□□□□ -1.05
CUX2O14529 AC039056.2-201ENST00000622261 511 ntBASIC8.5□□□□□ -1.05
CUX2O14529 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.5□□□□□ -1.05
CUX2O14529 NCLP2-201ENST00000416078 1462 ntBASIC8.5□□□□□ -1.05
CUX2O14529 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC8.49□□□□□ -1.05
CUX2O14529 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC8.49□□□□□ -1.05
CUX2O14529 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC8.49□□□□□ -1.05
CUX2O14529 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
CUX2O14529 MIR589-201ENST00000385238 99 ntBASIC8.49□□□□□ -1.05
CUX2O14529 PTMAP2-201ENST00000397627 327 ntBASIC8.49□□□□□ -1.05
CUX2O14529 BX276092.6-201ENST00000430476 250 ntBASIC8.49□□□□□ -1.05
CUX2O14529 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.49□□□□□ -1.05
CUX2O14529 AL162591.2-201ENST00000449634 317 ntBASIC8.49□□□□□ -1.05
CUX2O14529 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC8.49□□□□□ -1.05
CUX2O14529 BX276092.8-201ENST00000455722 250 ntBASIC8.49□□□□□ -1.05
CUX2O14529 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 SEPT10P1-201ENST00000517342 1162 ntBASIC8.49□□□□□ -1.05
CUX2O14529 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.49□□□□□ -1.05
CUX2O14529 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CUX2O14529 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC8.48□□□□□ -1.05
CUX2O14529 MAX-203ENST00000341653 330 ntTSL 2 BASIC8.48□□□□□ -1.05
CUX2O14529 RPS5P7-201ENST00000456664 608 ntBASIC8.48□□□□□ -1.05
CUX2O14529 AL139124.1-201ENST00000609123 421 ntBASIC8.48□□□□□ -1.05
CUX2O14529 AP000843.1-201ENST00000624880 701 ntBASIC8.48□□□□□ -1.05
CUX2O14529 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
CUX2O14529 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC8.48□□□□□ -1.05
CUX2O14529 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.48□□□□□ -1.05
CUX2O14529 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CUX2O14529 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CUX2O14529 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 AL731532.1-201ENST00000623972 4236 ntBASIC8.47□□□□□ -1.05
CUX2O14529 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CUX2O14529 MIR449B-201ENST00000384995 97 ntBASIC8.47□□□□□ -1.05
CUX2O14529 ATG4AP1-201ENST00000416893 538 ntBASIC8.47□□□□□ -1.05
CUX2O14529 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.47□□□□□ -1.05
CUX2O14529 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC8.47□□□□□ -1.05
CUX2O14529 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC8.47□□□□□ -1.05
CUX2O14529 AC084783.1-201ENST00000565846 910 ntBASIC8.47□□□□□ -1.05
CUX2O14529 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC8.47□□□□□ -1.05
CUX2O14529 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CUX2O14529 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CUX2O14529 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.47□□□□□ -1.05
CUX2O14529 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
CUX2O14529 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
CUX2O14529 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CUX2O14529 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
CUX2O14529 AC125257.1-201ENST00000560400 2930 ntBASIC8.46□□□□□ -1.05
CUX2O14529 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CUX2O14529 SSR1P1-201ENST00000407630 814 ntBASIC8.46□□□□□ -1.05
CUX2O14529 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CUX2O14529 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.46□□□□□ -1.05
CUX2O14529 AL161722.2-201ENST00000434731 981 ntBASIC8.46□□□□□ -1.05
CUX2O14529 RPL23AP56-201ENST00000460778 453 ntBASIC8.46□□□□□ -1.05
CUX2O14529 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC8.46□□□□□ -1.05
CUX2O14529 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC8.46□□□□□ -1.05
CUX2O14529 AC011626.1-201ENST00000604710 562 ntBASIC8.46□□□□□ -1.05
CUX2O14529 AC090948.1-201ENST00000607464 549 ntBASIC8.46□□□□□ -1.05
CUX2O14529 AC012409.3-201ENST00000611343 981 ntBASIC8.46□□□□□ -1.05
CUX2O14529 AC000095.2-202ENST00000637415 154 ntBASIC8.46□□□□□ -1.05
CUX2O14529 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
CUX2O14529 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
CUX2O14529 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.46□□□□□ -1.06
CUX2O14529 AL033543.1-201ENST00000623440 13454 ntBASIC8.46□□□□□ -1.06
CUX2O14529 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC8.46□□□□□ -1.06
CUX2O14529 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
CUX2O14529 RAD17P1-201ENST00000418130 2042 ntBASIC8.46□□□□□ -1.06
CUX2O14529 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.46□□□□□ -1.06
CUX2O14529 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
CUX2O14529 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC8.45□□□□□ -1.06
CUX2O14529 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms