Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.32□□□□□ -1.56
CCDC188H7C350 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CCDC188H7C350 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC188H7C350 RNA5SP319-201ENST00000362768 119 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 RNA5SP335-201ENST00000363817 110 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 RNU4-7P-201ENST00000364758 141 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC188H7C350 HMGB3P7-201ENST00000400214 611 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 EIF4A1P1-201ENST00000420241 934 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 HSPE1P16-201ENST00000426640 348 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 MTND4LP14-201ENST00000429447 288 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC002504.1-201ENST00000438281 691 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 PA2G4P6-201ENST00000438325 1197 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.31□□□□□ -1.56
CCDC188H7C350 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC006499.4-201ENST00000510947 694 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 AC016550.3-201ENST00000515706 767 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 RNU6-889P-201ENST00000517189 103 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 IGKV2-4-201ENST00000523070 340 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC134669.1-201ENST00000581275 672 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 RNF138P2-201ENST00000603490 592 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 AP005432.2-201ENST00000608162 586 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CCDC188H7C350 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
CCDC188H7C350 RBPJP2-201ENST00000618187 1444 ntBASIC5.31□□□□□ -1.56
CCDC188H7C350 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.31□□□□□ -1.56
CCDC188H7C350 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC068446.1-201ENST00000556425 1549 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 RNU4-39P-201ENST00000362455 127 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 RN7SKP113-201ENST00000363891 295 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 RN7SKP269-201ENST00000365545 319 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC092642.1-201ENST00000392417 425 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AP000580.1-201ENST00000404439 358 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 BTF3P9-201ENST00000418784 283 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 CR848007.2-201ENST00000424918 787 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC022022.1-201ENST00000430304 178 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 RPS26P4-201ENST00000431743 355 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 SUMO2P3-201ENST00000438311 288 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AL445433.1-201ENST00000457507 257 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC021146.7-201ENST00000509604 775 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC018442.3-201ENST00000523025 183 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC005363.1-201ENST00000530779 351 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC005868.1-201ENST00000536421 331 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC188H7C350 CYCSP40-201ENST00000575927 294 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC108865.2-201ENST00000606881 432 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 WBP1LP8-201ENST00000617401 327 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 DHX9P1-201ENST00000436565 3076 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.3□□□□□ -1.56
CCDC188H7C350 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.3□□□□□ -1.56
CCDC188H7C350 AC026523.2-201ENST00000625039 7739 ntBASIC5.3□□□□□ -1.56
CCDC188H7C350 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CCDC188H7C350 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.29□□□□□ -1.56
CCDC188H7C350 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCDC188H7C350 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCDC188H7C350 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms