Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SHISA3A0PJX4 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SHISA3A0PJX4 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC117529.2-201ENST00000512159 2068 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC107021.2-201ENST00000567714 2095 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 Z97989.1-201ENST00000531702 2421 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 FUNDC2P3-201ENST00000334716 533 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RNU6-582P-201ENST00000362989 107 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RNU6-216P-201ENST00000363282 104 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RNU6-1122P-201ENST00000384449 107 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RNA5SP297-201ENST00000391029 113 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OR7E101P-201ENST00000400428 513 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 ALDH7A1P4-201ENST00000412255 178 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL031005.1-201ENST00000416959 723 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 TMBIM7P-201ENST00000418074 855 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CHCHD3P1-201ENST00000425516 676 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL356583.2-201ENST00000426536 280 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RPL7P56-201ENST00000429441 717 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RPL7P4-203ENST00000430239 730 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 PRPS1P2-201ENST00000430496 937 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 BMS1P19-201ENST00000433925 393 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OR5G3-201ENST00000435756 929 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RPL37P21-201ENST00000435890 276 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL118496.2-201ENST00000448300 230 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 USP9YP12-201ENST00000450481 570 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OFD1P4Y-201ENST00000455273 1179 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC010878.1-201ENST00000456500 1047 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RN7SL379P-201ENST00000479912 293 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC127024.1-201ENST00000490847 418 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL035404.1-201ENST00000497982 568 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 HMGB1P23-201ENST00000518743 568 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OR5M7P-201ENST00000526140 972 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AP001893.2-201ENST00000526949 202 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC018523.1-201ENST00000534211 512 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 OR4N2-203ENST00000557677 1008 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 MIR4258-201ENST00000580920 91 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RN7SL697P-201ENST00000582484 299 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 NDUFA3P1-201ENST00000588007 252 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC008752.3-201ENST00000588113 712 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC063977.5-201ENST00000601044 974 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 MEMO1P5-201ENST00000604810 406 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC008277.2-201ENST00000605196 797 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC097467.4-201ENST00000605504 141 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC245407.2-201ENST00000614199 451 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC009033.1-201ENST00000624279 431 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC093591.3-201ENST00000634516 308 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 DMD-222ENST00000474231 5209 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC005332.9-201ENST00000620266 2921 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 AC092326.2-201ENST00000624772 1561 ntBASIC5.92□□□□□ -1.46
SHISA3A0PJX4 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.92□□□□□ -1.46
SHISA3A0PJX4 ZNF37BP-203ENST00000452306 1352 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms