Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC013404.1-201ENST00000413068 249 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 MTCYBP8-201ENST00000422855 651 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 TEX41-204ENST00000423031 491 ntTSL 4 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 SKP1P1-201ENST00000438081 489 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 HSPE1P28-201ENST00000443139 211 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC132479.1-201ENST00000449160 144 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AL672138.1-201ENST00000450604 1015 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC073594.1-201ENST00000462065 364 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 PTP4A1P4-201ENST00000512479 322 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC120036.3-201ENST00000517826 292 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 EEF1A1P17-201ENST00000547505 1275 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC026826.3-201ENST00000561747 158 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC063977.7-201ENST00000594454 337 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC012175.1-201ENST00000603755 531 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC037198.3-201ENST00000616754 526 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AC068722.2-201ENST00000618734 544 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 KDM5A-201ENST00000399788 10763 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 LRRC37A9P-201ENST00000603850 5376 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 IPO9-201ENST00000361565 11435 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 RNF24-203ENST00000432261 3149 ntTSL 5 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 TCF4-203ENST00000398339 2551 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 OR5BR1P-201ENST00000524992 1330 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 MAPK10-347ENST00000641762 2856 ntBASIC9.53□□□□□ -0.88
PHF8Q9UPP1 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
PHF8Q9UPP1 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.88
PHF8Q9UPP1 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
PHF8Q9UPP1 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC9.52□□□□□ -0.88
PHF8Q9UPP1 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
PHF8Q9UPP1 DLEU2L-201ENST00000371086 3555 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC009831.5-201ENST00000624000 3189 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 RNU6-533P-201ENST00000384144 107 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 MIR217-201ENST00000384817 110 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 RNU6-510P-201ENST00000391239 108 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 RNA5SP431-201ENST00000410312 120 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 Y_RNA.605-201ENST00000410577 105 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AL359704.1-201ENST00000411586 781 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 SNRPFP1-201ENST00000414761 252 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 Z93242.1-201ENST00000427102 353 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 Z82205.1-201ENST00000428456 297 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 SNRPEP4-201ENST00000435815 279 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 PPIAP17-201ENST00000438507 471 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 GAPDHP20-201ENST00000444107 1007 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AP003467.2-201ENST00000520175 319 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AP005597.2-201ENST00000526238 341 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 OLR1-209ENST00000543993 822 ntTSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AC010928.1-201ENST00000592477 1447 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 CT45A7-201ENST00000610598 996 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC9.52□□□□□ -0.89
PHF8Q9UPP1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 ATM-228ENST00000639240 498 ntTSL 5 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
PHF8Q9UPP1 FGF9-201ENST00000382353 4220 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PHF8Q9UPP1 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
PHF8Q9UPP1 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
PHF8Q9UPP1 SALL1P1-201ENST00000438101 3837 ntBASIC9.51□□□□□ -0.89
PHF8Q9UPP1 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC9.51□□□□□ -0.89
PHF8Q9UPP1 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms