Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC006349.1-201ENST00000555526 235 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 MIR4472-2-201ENST00000582069 67 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC025574.1-201ENST00000554784 1653 ntBASIC6□□□□□ -1.45
CLIP2Q9UDT6 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC6□□□□□ -1.45
CLIP2Q9UDT6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CLIP2Q9UDT6 AC006210.2-201ENST00000367074 1545 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 SOCS5P3-201ENST00000425115 1576 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 CASC19-255ENST00000641733 1385 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 RNA5SP296-201ENST00000410523 111 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 VN1R96P-201ENST00000446052 858 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 HIGD1AP8-201ENST00000453927 274 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC104849.1-201ENST00000462623 405 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC097173.1-201ENST00000505862 819 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 OR7E128P-201ENST00000532736 1024 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AL390334.1-201ENST00000556395 450 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC105254.2-201ENST00000603636 436 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 BNIP3P35-201ENST00000604530 490 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AP005432.2-201ENST00000608162 586 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC116651.1-201ENST00000609724 556 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AL049539.1-201ENST00000611964 459 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC073575.2-201ENST00000614212 627 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 MIR6839-201ENST00000620425 113 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC026523.2-201ENST00000625039 7739 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.99□□□□□ -1.45
CLIP2Q9UDT6 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 RNA5SP223-201ENST00000365174 120 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 MIR585-201ENST00000384887 94 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 NPM1P40-201ENST00000412758 733 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AL157385.1-201ENST00000446973 268 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 RN7SL443P-201ENST00000464331 290 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 COX6B1P5-201ENST00000509843 249 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC022884.2-201ENST00000578535 580 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 MIR3934-201ENST00000579806 107 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AP001784.1-201ENST00000624107 428 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 Z95331.1-201ENST00000623075 23112 ntBASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
CLIP2Q9UDT6 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
CLIP2Q9UDT6 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms