Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 SCARNA15-201ENST00000607520 4325 ntBASIC4.93□□□□□ -1.62
TREX1Q9NSU2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
TREX1Q9NSU2 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 DHX9P1-201ENST00000436565 3076 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC008549.2-201ENST00000333482 706 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 SNORA51.1-201ENST00000363243 140 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AL078599.1-201ENST00000402075 293 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 RNA5SP345-201ENST00000410646 108 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 CKS1BP6-201ENST00000424932 240 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC092162.1-201ENST00000432828 434 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 EEF1B2P5-201ENST00000444820 548 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AL589765.3-201ENST00000446084 462 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 RHEBP2-201ENST00000450289 600 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC239798.3-201ENST00000454459 408 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC090686.1-201ENST00000481577 749 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC004980.4-201ENST00000513375 203 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 RFPL4AP5-201ENST00000514977 504 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC008758.3-201ENST00000507003 1829 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AL606537.1-201ENST00000607258 2011 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 AC093775.1-201ENST00000624154 1868 ntBASIC4.92□□□□□ -1.62
TREX1Q9NSU2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
TREX1Q9NSU2 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 RNU4-44P-201ENST00000363050 141 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 GAPDHP15-201ENST00000398586 975 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 Z97832.1-201ENST00000402490 328 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 GJA6P-201ENST00000415117 1042 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AL137845.2-201ENST00000444292 988 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC093890.1-201ENST00000502554 540 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC006499.3-201ENST00000506077 748 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 MIR3691-201ENST00000578066 90 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 RN7SL435P-201ENST00000584418 282 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AL512624.1-201ENST00000613638 469 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 AP001005.3-201ENST00000622049 129 ntBASIC4.91□□□□□ -1.62
TREX1Q9NSU2 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.91□□□□□ -1.62
TREX1Q9NSU2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
TREX1Q9NSU2 RNU6-233P-201ENST00000410845 141 ntBASIC4.9□□□□□ -1.63
TREX1Q9NSU2 TBCAP2-201ENST00000416175 326 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms