Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AC040958.1-201ENST00000561102 201 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHD8Q9HCK8 SMG1P4-204ENST00000523028 4131 ntBASIC4.64□□□□□ -1.67
CHD8Q9HCK8 AL162739.1-201ENST00000450606 307 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC005252.1-201ENST00000604518 1063 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 DMD-205ENST00000359836 7339 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC006210.2-201ENST00000367074 1545 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AL359715.3-201ENST00000569267 2123 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AL450345.1-202ENST00000605741 3881 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 SNORA77-201ENST00000408716 125 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 OR4K6P-201ENST00000416478 897 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AL645608.4-201ENST00000423619 154 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC018644.1-201ENST00000429934 551 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 RPS3AP54-201ENST00000435535 734 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AL356276.2-201ENST00000435919 558 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 BX679664.2-201ENST00000439282 283 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 UQCRHP4-201ENST00000471686 272 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
CHD8Q9HCK8 AL133268.1-201ENST00000405676 1401 ntBASIC4.63□□□□□ -1.67
CHD8Q9HCK8 TTC41P-205ENST00000551270 3963 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL592148.3-201ENST00000608771 2646 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL512428.1-201ENST00000562221 654 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC087821.1-201ENST00000623639 567 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 CLIC5-201ENST00000185206 6023 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 RNA5SP90-201ENST00000364801 99 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 SNORA66-201ENST00000384792 133 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 UQCRBP1-201ENST00000421129 336 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AP000619.3-201ENST00000535634 1127 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AC105129.1-201ENST00000560250 297 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 DDX18P6-201ENST00000450119 1997 ntBASIC4.62□□□□□ -1.67
CHD8Q9HCK8 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CHD8Q9HCK8 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms