Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 RNU1-149P-201ENST00000390870 161 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 EI24P3-201ENST00000399046 1062 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL589647.1-201ENST00000402485 466 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL139128.1-201ENST00000413921 941 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL158053.1-201ENST00000441503 453 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 MTND6P5-201ENST00000448266 512 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL389915.2-201ENST00000454576 441 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 MTND2P30-201ENST00000456663 382 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 OR9N1P-201ENST00000491296 333 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC008953.1-201ENST00000497334 318 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 HMGN1P15-201ENST00000513870 295 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 RN7SKP253-201ENST00000516424 309 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 CDH12P4-201ENST00000517835 295 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 CDH12P3-201ENST00000517935 295 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 CDH12P1-201ENST00000518435 295 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 OR5D15P-201ENST00000531671 942 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 TAS2R6P-201ENST00000605022 826 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL049539.1-201ENST00000611964 459 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AL590410.1-201ENST00000617925 333 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AP002799.1-201ENST00000623552 423 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AP006248.3-201ENST00000623580 594 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC073342.3-201ENST00000624211 193 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC119674.1-220ENST00000641502 1048 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
TM9SF4Q92544 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 AC093909.5-201ENST00000621839 1799 ntBASIC5.04□□□□□ -1.6
TM9SF4Q92544 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
TM9SF4Q92544 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM9SF4Q92544 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AL359715.3-201ENST00000569267 2123 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AL592494.2-201ENST00000425455 1548 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 MIR133B-201ENST00000362210 119 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 CCNB2P1-201ENST00000399411 1150 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 RPL37P18-201ENST00000411602 243 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 NANOGP9-201ENST00000439890 892 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AL596266.1-201ENST00000448132 400 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC073850.1-201ENST00000449243 255 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 RPL7P40-201ENST00000481703 745 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 NDUFB5P1-201ENST00000508134 564 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 RN7SKP157-201ENST00000516174 282 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 RN7SKP66-201ENST00000516681 231 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 MTND1P6-201ENST00000523621 946 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 MTND5P21-201ENST00000531961 522 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC126365.2-201ENST00000580630 379 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 MIR7853-201ENST00000584820 132 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AP003117.1-201ENST00000602771 554 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC095055.1-201ENST00000603472 1113 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.03□□□□□ -1.6
TM9SF4Q92544 AL671309.1-201ENST00000603750 544 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC110792.4-201ENST00000609843 298 ntBASIC5.03□□□□□ -1.6
TM9SF4Q92544 AC084824.5-201ENST00000612009 413 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms