Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC016724.1-201ENST00000453215 421 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 SSXP1-201ENST00000453640 473 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 RPL7L1P3-201ENST00000455249 689 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 RPSAP37-201ENST00000470913 821 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC104971.1-201ENST00000495117 578 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 STMN1P2-201ENST00000508435 439 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 RNU6-314P-201ENST00000516574 104 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 MTCO3P15-201ENST00000526563 574 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AP005119.2-201ENST00000579735 1105 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC005726.4-201ENST00000582858 458 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC010680.3-201ENST00000604215 520 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AL022154.1-201ENST00000604698 785 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC068276.1-201ENST00000605793 379 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 MIR3688-2-201ENST00000636963 87 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 MTND5P23-201ENST00000430812 1655 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 AC023245.2-201ENST00000530760 2978 ntBASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.8□□□□□ -1.32
SHKBP1Q8TBC3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MTCO1P18-201ENST00000455518 1419 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MRPS27-201ENST00000261413 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TMSB4XP4-201ENST00000323496 618 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 CIR1P3-201ENST00000405137 479 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RNU2-17P-201ENST00000410290 190 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MTCYBP24-201ENST00000420387 1106 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 NPM1P22-201ENST00000427761 952 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC069154.1-201ENST00000432914 542 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TCEA1P3-201ENST00000443005 880 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RPL36AP33-201ENST00000450395 310 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RNA5SP269-201ENST00000459032 137 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RN7SL254P-201ENST00000460609 284 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC084024.2-201ENST00000503480 791 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC139272.1-201ENST00000505516 640 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC131392.1-201ENST00000506490 633 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MTCO3P9-201ENST00000506989 781 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 Y_RNA.701-201ENST00000516812 110 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 NPIPB14P-203ENST00000532298 987 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AL442663.2-201ENST00000554385 511 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC023968.1-201ENST00000560719 475 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 BPTFP1-201ENST00000579209 492 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC022432.1-201ENST00000595739 310 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 RPSAP75-201ENST00000605848 301 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MIR6085-201ENST00000618314 110 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 USP12-203ENST00000620323 349 ntTSL 3 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MIR6811-201ENST00000620409 58 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 AC015871.5-202ENST00000623252 701 ntBASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
SHKBP1Q8TBC3 MTND5P26-201ENST00000426018 1752 ntBASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms