Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC097063.1-201ENST00000426714 1797 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC099786.3-201ENST00000565735 1410 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 TTC39DP-201ENST00000416781 1688 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RNU1-134P-201ENST00000362935 165 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP275-201ENST00000364626 301 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC234772.1-201ENST00000377927 937 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 Y_RNA.599-201ENST00000410489 109 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 OSTCP5-201ENST00000425293 453 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 FO393419.3-201ENST00000428741 282 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 BX276092.6-201ENST00000430476 250 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC010153.1-201ENST00000432862 727 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 CYCSP42-201ENST00000450823 238 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 BX276092.8-201ENST00000455722 250 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RN7SL254P-201ENST00000460609 284 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 TPT1P3-201ENST00000492841 512 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC008429.4-201ENST00000521201 182 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 TPM3P3-201ENST00000521343 354 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC005244.1-201ENST00000582566 339 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 NBR2-204ENST00000587322 63 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 uc_338.26-201ENST00000612659 160 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC092608.3-201ENST00000625017 386 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AC008432.1-201ENST00000615912 1320 ntBASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.67□□□□□ -1.5
SIMC1Q8NDZ2 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 AC027228.2-201ENST00000567141 2154 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 HSPD1P11-201ENST00000508643 1702 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 SNORA5.1-201ENST00000384275 131 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RNU6-452P-201ENST00000384406 107 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 MIR130B-202ENST00000385018 82 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RPS27AP11-201ENST00000402798 447 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 AL096711.1-201ENST00000404780 554 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RN7SKP206-201ENST00000410823 293 ntBASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC5.66□□□□□ -1.5
SIMC1Q8NDZ2 RPL35AP31-201ENST00000418340 337 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms