Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 RN7SKP292-201ENST00000365522 317 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC004386.1-201ENST00000393214 761 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC005522.1-201ENST00000395416 346 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 RPL5P19-201ENST00000404228 893 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 RNU6-564P-201ENST00000410983 104 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AL358176.3-201ENST00000420757 454 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AJ239321.1-201ENST00000424255 564 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AL139148.1-201ENST00000427122 680 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC243772.1-201ENST00000451620 410 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC005412.2-201ENST00000492004 341 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC097173.1-201ENST00000505862 819 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 PGBD4P4-201ENST00000509673 613 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC060775.1-201ENST00000518241 520 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC008147.3-201ENST00000548666 354 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC068305.2-201ENST00000550567 1205 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC026826.3-201ENST00000561747 158 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC005479.3-201ENST00000602790 431 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC132068.1-201ENST00000623805 459 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AL356317.1-201ENST00000396110 1436 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 CD86-204ENST00000469710 1604 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 AC090971.4-201ENST00000560291 1800 ntBASIC4.28□□□□□ -1.72
CCDC71LQ8N9Z2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 KARSP1-201ENST00000451871 1752 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 SNORA16A-201ENST00000384342 137 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ATP5F1P2-201ENST00000398143 760 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 U3.32-201ENST00000408116 212 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 Z68694.1-201ENST00000413929 841 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 TRIM60P17-201ENST00000415181 719 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 RPL34P3-201ENST00000421454 338 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC069154.1-201ENST00000432914 542 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AL356981.1-201ENST00000454879 684 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC108161.1-201ENST00000461060 402 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC112206.1-201ENST00000468416 477 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 RPL23AP53-201ENST00000521854 457 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC097505.1-201ENST00000610199 565 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC008115.3-201ENST00000614874 549 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AC074101.1-201ENST00000637861 241 ntBASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC71LQ8N9Z2 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms