Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RNU6-1297P-201ENST00000384415 104 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RNU6-1222P-201ENST00000384615 107 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RNU6-1148P-201ENST00000410992 104 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 NIPA2P1-201ENST00000426223 976 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 GAPDHP34-201ENST00000432112 823 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 NQO1-204ENST00000439109 924 ntTSL 2 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 GHRL-210ENST00000449238 440 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RPL26P30-201ENST00000453533 435 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RN7SL145P-201ENST00000469955 296 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RNU6-988P-201ENST00000519081 107 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AC087257.2-201ENST00000538759 928 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 LINC02389-202ENST00000540024 557 ntTSL 4 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AC063950.1-201ENST00000552036 308 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 COX6CP11-201ENST00000555293 229 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 ARGFXP2-201ENST00000579304 949 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AP001330.4-201ENST00000604350 154 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AC099654.6-201ENST00000636487 512 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 AC092447.10-201ENST00000620607 1652 ntBASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 PJA2-201ENST00000361189 4889 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SCUBE3Q8IX30 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 WNK1-220ENST00000574564 1401 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 CDC40-201ENST00000307731 3848 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 GPR19-201ENST00000332427 1743 ntAPPRIS P1 TSL 4 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 OR11H4-201ENST00000315409 1082 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 Y_RNA.231-201ENST00000364358 102 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RNA5SP396-201ENST00000364834 120 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RGS8-202ENST00000367556 843 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 SNRPD3-202ENST00000402849 567 ntTSL 2 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RNU2-3P-201ENST00000410144 191 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RN7SKP236-201ENST00000410635 284 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RPLP1P10-201ENST00000413972 339 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC009413.1-201ENST00000414823 399 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 VWC2L-IT1-201ENST00000416430 467 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 ATP5JP1-201ENST00000431631 322 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC105393.2-201ENST00000431911 549 ntTSL 4 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 IGKV6D-21-201ENST00000436451 409 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 CACYBPP1-201ENST00000438592 684 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC012512.1-201ENST00000446594 718 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AL162395.1-201ENST00000457882 422 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RN7SL870P-201ENST00000460111 296 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC096922.1-201ENST00000461635 651 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC138409.2-202ENST00000507274 458 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RNU6-583P-201ENST00000516012 92 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 RNU6-559P-201ENST00000516151 98 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AP005902.1-201ENST00000521358 186 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 OR5D2P-201ENST00000524390 911 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC023310.2-201ENST00000553844 547 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC012447.1-201ENST00000577914 682 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC010525.2-201ENST00000590920 195 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 EIF1-207ENST00000591776 797 ntTSL 4 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 TPMTP1-201ENST00000592307 737 ntBASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.78□□□□□ -1.16
SCUBE3Q8IX30 Z84480.1-201ENST00000605131 311 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms