Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 SAMMSON-209ENST00000641222 1100 ntBASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
NUDCD3Q8IVD9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC008549.2-201ENST00000333482 706 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 RN7SKP124-201ENST00000364730 341 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL512422.1-201ENST00000407033 553 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 VN1R3-201ENST00000418822 919 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 TRGV7-201ENST00000427089 353 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 BX323845.1-201ENST00000432417 179 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC092162.1-201ENST00000432828 434 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 MRPL48P1-201ENST00000445390 636 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC012339.2-201ENST00000523996 453 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC069307.1-201ENST00000602820 447 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 SUGT1P3-202ENST00000604259 383 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL713998.2-201ENST00000604538 1198 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AL691477.1-201ENST00000624398 162 ntBASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
NUDCD3Q8IVD9 AC112255.1-201ENST00000624070 2493 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 PANDAR-201ENST00000629595 1506 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC009643.2-201ENST00000603543 1448 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 BMS1P3-201ENST00000372011 932 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 SNORA70.10-201ENST00000384515 134 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 SNORA77-201ENST00000408716 125 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 CYCSP12-201ENST00000437729 300 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 NPM1P29-201ENST00000483112 803 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AP001960.1-201ENST00000506494 658 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC134349.2-201ENST00000535136 910 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC126177.5-201ENST00000549599 178 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC027243.2-201ENST00000602530 724 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AL121890.2-201ENST00000617644 465 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 AL359922.3-201ENST00000624779 1670 ntBASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
NUDCD3Q8IVD9 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL034370.1-201ENST00000397254 1590 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 SNORA67-201ENST00000384423 137 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 RGS17P1-201ENST00000423358 553 ntBASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.91□□□□□ -1.62
NUDCD3Q8IVD9 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms