Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 MIR6875-201ENST00000617506 72 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 MEF2C-209ENST00000504921 7561 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 NFIB-205ENST00000380959 8198 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC007618.1-201ENST00000366455 732 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 SNORA11.1-201ENST00000408133 129 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 TBCAP2-201ENST00000416175 326 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AL590399.2-201ENST00000427536 309 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 U3.53-201ENST00000628922 216 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC012442.3-202ENST00000636742 206 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CASC19-243ENST00000641588 1546 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VPS13CQ709C8 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
VPS13CQ709C8 AC011447.7-201ENST00000624228 1590 ntBASIC3.83□□□□□ -1.8
VPS13CQ709C8 OR56B2P-202ENST00000641377 2453 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 ARL4AP4-201ENST00000434170 518 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC108064.1-201ENST00000513791 460 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 RN7SKP248-201ENST00000516278 305 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 RNU1-103P-201ENST00000516502 125 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RLIMP1-201ENST00000339626 1680 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 CSMD2-210ENST00000619121 13430 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 DRP2-205ENST00000541709 6835 ntAPPRIS ALT1 TSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RPS27AP11-201ENST00000402798 447 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 RN7SKP83-201ENST00000516512 178 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 MIR3200-201ENST00000580767 85 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AL359195.2-201ENST00000623657 4412 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC017104.4-201ENST00000636283 1592 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RIPOR2-206ENST00000538035 5389 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC135352.1-201ENST00000506173 1418 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 HSFY1P1-201ENST00000423928 1178 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 FTH1P16-201ENST00000435241 552 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 AC006499.6-201ENST00000511169 607 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.82□□□□□ -1.8
VPS13CQ709C8 RN7SL339P-201ENST00000580597 296 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 AL133243.1-201ENST00000614487 366 ntBASIC3.82□□□□□ -1.8
VPS13CQ709C8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VPS13CQ709C8 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC3.81□□□□□ -1.8
VPS13CQ709C8 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VPS13CQ709C8 SNORA63.1-201ENST00000362493 131 ntBASIC3.81□□□□□ -1.8
VPS13CQ709C8 SDHCP2-201ENST00000398565 501 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms