Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 RLIMP2-201ENST00000427891 1563 ntBASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHROOM1Q2M3G4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 RN7SKP113-201ENST00000363891 295 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 ATP5HP3-201ENST00000396994 486 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AL390316.1-201ENST00000406279 553 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 U3.32-201ENST00000408116 212 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 GTF2IP5-201ENST00000414608 731 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 RPS29P9-201ENST00000440360 171 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 RN7SL197P-201ENST00000466981 299 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC022133.1-201ENST00000490961 571 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 NPM1P28-201ENST00000492269 840 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AP001880.2-201ENST00000538233 448 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 RN7SL290P-201ENST00000578661 300 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC234771.5-201ENST00000600161 514 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC108359.1-201ENST00000616451 1211 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AC087821.1-201ENST00000623639 567 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 ZNF652P1-201ENST00000442420 1309 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 AL606537.1-201ENST00000607258 2011 ntBASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SHROOM1Q2M3G4 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC099654.2-201ENST00000433031 1980 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 GLULP6-201ENST00000399502 913 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 FABP12P1-201ENST00000401911 322 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 GNG5P5-201ENST00000420444 220 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 ELOCP3-201ENST00000439303 348 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AL356390.1-201ENST00000455684 397 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC108751.3-201ENST00000461814 1020 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC005412.2-201ENST00000492004 341 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 DUX4L52-201ENST00000549363 777 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 EDDM3DP-201ENST00000554692 434 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 CASC19-260ENST00000641828 2001 ntBASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SHROOM1Q2M3G4 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC079741.1-201ENST00000321498 212 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 RNU1-32P-201ENST00000363937 159 ntBASIC5.85□□□□□ -1.47
SHROOM1Q2M3G4 AC007559.1-201ENST00000428736 355 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms