Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RPS17P2-201ENST00000461663 408 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 RPSAP50-201ENST00000481955 852 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 AC010350.1-201ENST00000504908 231 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AC004980.4-201ENST00000513375 203 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 RN7SKP66-201ENST00000516681 231 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AC013701.1-201ENST00000522657 465 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AC012339.2-201ENST00000523996 453 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 HMGN2P6-201ENST00000551091 273 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 BX005214.3-202ENST00000619809 325 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 AC018445.2-201ENST00000622987 260 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
H3F3AP84243 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 MTCO1P15-201ENST00000529569 1526 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
H3F3AP84243 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.5□□□□□ -1.69
H3F3AP84243 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
H3F3AP84243 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.5□□□□□ -1.69
H3F3AP84243 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
H3F3AP84243 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.49□□□□□ -1.69
H3F3AP84243 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 RNA5SP507-201ENST00000363603 121 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 SNORA66-201ENST00000384792 133 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 RN7SKP213-201ENST00000410746 298 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 AC007738.1-201ENST00000413892 348 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.49□□□□□ -1.69
H3F3AP84243 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.49□□□□□ -1.69
H3F3AP84243 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.49□□□□□ -1.69
H3F3AP84243 RHOT1P3-201ENST00000436571 331 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 TCEA1P1-201ENST00000449716 880 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.49□□□□□ -1.69
H3F3AP84243 AC073073.1-201ENST00000493920 463 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.49□□□□□ -1.69
H3F3AP84243 AC116553.2-201ENST00000564203 463 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.49□□□□□ -1.69
H3F3AP84243 MIR4691-201ENST00000583764 85 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 AC087763.1-201ENST00000603391 286 ntBASIC4.49□□□□□ -1.69
H3F3AP84243 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.49□□□□□ -1.69
H3F3AP84243 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
H3F3AP84243 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
H3F3AP84243 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
H3F3AP84243 AC004817.4-201ENST00000602396 3625 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 TTC39DP-201ENST00000416781 1688 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
H3F3AP84243 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 AC007996.1-201ENST00000620414 2821 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 AL731532.2-201ENST00000623542 1953 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.48□□□□□ -1.69
H3F3AP84243 RNA5SP428-201ENST00000365129 132 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 MIR105-2-201ENST00000385083 81 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 AC013442.1-201ENST00000397347 228 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 LRRC37BP1-201ENST00000398851 714 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 Z97832.1-201ENST00000402490 328 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 GJA6P-201ENST00000415117 1042 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.48□□□□□ -1.69
H3F3AP84243 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.48□□□□□ -1.69
H3F3AP84243 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.48□□□□□ -1.69
H3F3AP84243 ZDHHC20P1-204ENST00000435787 423 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.48□□□□□ -1.69
H3F3AP84243 GTF3AP5-201ENST00000442645 697 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
H3F3AP84243 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.48□□□□□ -1.69
H3F3AP84243 RN7SL214P-201ENST00000487317 265 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 RN7SKP147-201ENST00000517154 244 ntBASIC4.48□□□□□ -1.69
H3F3AP84243 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms