Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC087565.3-203ENST00000641018 837 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 HSPD1P14-201ENST00000432666 1618 ntBASIC4.52□□□□□ -1.69
CX3CL1P78423 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.52□□□□□ -1.69
CX3CL1P78423 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.52□□□□□ -1.69
CX3CL1P78423 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CX3CL1P78423 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC093311.1-201ENST00000506586 2021 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 METTL21EP-201ENST00000298105 713 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 U3.7-201ENST00000363668 216 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC234772.1-201ENST00000377927 937 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
CX3CL1P78423 HMGB3P31-201ENST00000413333 595 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 VTA1P1-201ENST00000414044 866 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 EIF4A1P1-201ENST00000420241 934 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 RPS3P2-201ENST00000421346 701 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC241520.1-201ENST00000422654 1099 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC127526.2-201ENST00000426436 775 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CL1P78423 KCTD9P1-201ENST00000430462 1167 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC092106.1-201ENST00000444291 373 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AL096803.2-201ENST00000450032 677 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 NPM1P19-201ENST00000450070 712 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 RPL7P48-201ENST00000461513 746 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 HMGB1P38-201ENST00000490557 577 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 EIF3LP3-201ENST00000495197 822 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC093890.1-201ENST00000502554 540 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 TPT1P8-201ENST00000510120 555 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC108471.1-201ENST00000513977 287 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC022884.3-201ENST00000579571 248 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 RN7SL622P-201ENST00000585292 275 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.51□□□□□ -1.69
CX3CL1P78423 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC124016.2-201ENST00000610058 665 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AL162574.1-201ENST00000615702 950 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 AC099654.9-201ENST00000637055 678 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC006927.2-201ENST00000639256 389 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
CX3CL1P78423 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 GTF2H2B-203ENST00000508065 1432 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 MRRFP1-201ENST00000435941 1675 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CX3CL1P78423 AL132640.2-201ENST00000559968 1698 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AL138820.1-201ENST00000617901 5305 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 HSPA8P14-201ENST00000552265 1805 ntBASIC4.51□□□□□ -1.69
CX3CL1P78423 AC083843.2-201ENST00000568248 6253 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
CX3CL1P78423 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 AL603750.1-201ENST00000624216 1717 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 AC091305.2-201ENST00000624049 1576 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 RNU5B-4P-201ENST00000363508 111 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CX3CL1P78423 SNORA70.6-201ENST00000383934 134 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 HMGB1P20-201ENST00000402555 677 ntBASIC4.5□□□□□ -1.69
CX3CL1P78423 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.5□□□□□ -1.69
CX3CL1P78423 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC4.5□□□□□ -1.69
CX3CL1P78423 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms