Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC124916.2-201ENST00000604416 224 ntBASIC4.29□□□□□ -1.72
AP3S2P59780 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP3S2P59780 AC074101.1-201ENST00000637861 241 ntBASIC4.29□□□□□ -1.72
AP3S2P59780 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.29□□□□□ -1.72
AP3S2P59780 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
AP3S2P59780 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AP3S2P59780 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
AP3S2P59780 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
AP3S2P59780 AL451142.2-201ENST00000429076 2090 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 OR13C3-201ENST00000374781 1108 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 MIR195-201ENST00000385194 87 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 SNORD96B-201ENST00000386148 79 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 HMGB1P20-201ENST00000402555 677 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.28□□□□□ -1.72
AP3S2P59780 AL137847.1-201ENST00000416473 444 ntTSL 2 BASIC4.28□□□□□ -1.72
AP3S2P59780 QRSL1P2-201ENST00000418582 964 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 BX323845.3-201ENST00000428215 527 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 AL512637.1-201ENST00000439523 1231 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 PA2G4P1-201ENST00000442248 1197 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 RN7SL817P-201ENST00000480777 288 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 AC122714.1-201ENST00000502510 459 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 LSM3P4-201ENST00000502948 309 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 HMGB3P13-201ENST00000511263 607 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.28□□□□□ -1.72
AP3S2P59780 VTA1P2-201ENST00000520205 911 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.28□□□□□ -1.72
AP3S2P59780 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC4.28□□□□□ -1.72
AP3S2P59780 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.28□□□□□ -1.72
AP3S2P59780 CYCSP28-201ENST00000534284 321 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.28□□□□□ -1.72
AP3S2P59780 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.28□□□□□ -1.72
AP3S2P59780 MIR4502-201ENST00000580432 81 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC4.28□□□□□ -1.72
AP3S2P59780 AC079298.2-201ENST00000623885 459 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 CU639417.4-201ENST00000623928 207 ntBASIC4.28□□□□□ -1.72
AP3S2P59780 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP3S2P59780 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.28□□□□□ -1.72
AP3S2P59780 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.28□□□□□ -1.72
AP3S2P59780 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
AP3S2P59780 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
AP3S2P59780 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.73
AP3S2P59780 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 TLK1P1-201ENST00000456760 2440 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AL445487.1-201ENST00000415694 1580 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.27□□□□□ -1.73
AP3S2P59780 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AL121950.1-201ENST00000624993 2077 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AP3S2P59780 RNA5SP273-201ENST00000362484 113 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
AP3S2P59780 AL133388.1-201ENST00000404509 287 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 U3.35-201ENST00000408405 208 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 RPS4XP18-201ENST00000495480 763 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC4.27□□□□□ -1.73
AP3S2P59780 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 HMGB1P40-201ENST00000525121 540 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 GLRXP2-201ENST00000555594 321 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AC107958.1-201ENST00000556576 290 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AC007066.2-202ENST00000566531 914 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.27□□□□□ -1.73
AP3S2P59780 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC4.27□□□□□ -1.73
AP3S2P59780 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
AP3S2P59780 AC004241.3-201ENST00000611728 517 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 AC132068.1-201ENST00000623805 459 ntBASIC4.27□□□□□ -1.73
AP3S2P59780 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.27□□□□□ -1.73
AP3S2P59780 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms