Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.48□□□□□ -1.69
SRP9P49458 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.48□□□□□ -1.69
SRP9P49458 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.48□□□□□ -1.69
SRP9P49458 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
SRP9P49458 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.48□□□□□ -1.69
SRP9P49458 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
SRP9P49458 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
SRP9P49458 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 AC006210.2-201ENST00000367074 1545 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AC011493.1-201ENST00000596753 1632 ntBASIC4.47□□□□□ -1.69
SRP9P49458 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
SRP9P49458 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.47□□□□□ -1.69
SRP9P49458 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SRP9P49458 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SRP9P49458 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
SRP9P49458 RPL35AP24-201ENST00000413846 330 ntBASIC4.47□□□□□ -1.69
SRP9P49458 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 AL355433.1-201ENST00000422804 300 ntBASIC4.47□□□□□ -1.69
SRP9P49458 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 CLUHP1-201ENST00000435012 1190 ntBASIC4.47□□□□□ -1.69
SRP9P49458 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 RPS29P10-201ENST00000439197 166 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.47□□□□□ -1.69
SRP9P49458 PTMAP3-201ENST00000447474 330 ntBASIC4.47□□□□□ -1.69
SRP9P49458 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 AC112206.1-201ENST00000468416 477 ntBASIC4.47□□□□□ -1.69
SRP9P49458 COPS8P2-201ENST00000473228 627 ntBASIC4.47□□□□□ -1.69
SRP9P49458 RPS4XP1-201ENST00000482189 787 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AC015864.1-201ENST00000496512 544 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.47□□□□□ -1.69
SRP9P49458 AC006427.1-201ENST00000514359 712 ntBASIC4.47□□□□□ -1.69
SRP9P49458 RN7SKP46-201ENST00000515942 234 ntBASIC4.47□□□□□ -1.69
SRP9P49458 RNA5SP249-201ENST00000516127 99 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC4.47□□□□□ -1.69
SRP9P49458 HNRNPRP2-201ENST00000528421 743 ntBASIC4.47□□□□□ -1.69
SRP9P49458 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.47□□□□□ -1.69
SRP9P49458 MIR4489-201ENST00000578869 62 ntBASIC4.47□□□□□ -1.69
SRP9P49458 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.47□□□□□ -1.69
SRP9P49458 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.47□□□□□ -1.69
SRP9P49458 AL162431.4-201ENST00000604674 411 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.47□□□□□ -1.69
SRP9P49458 LINC00901.1-201ENST00000617252 152 ntBASIC4.47□□□□□ -1.69
SRP9P49458 AP003499.2-201ENST00000624100 483 ntBASIC4.47□□□□□ -1.69
SRP9P49458 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.47□□□□□ -1.69
SRP9P49458 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SRP9P49458 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SRP9P49458 CIR1P2-201ENST00000514821 1342 ntBASIC4.46□□□□□ -1.69
SRP9P49458 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SRP9P49458 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.46□□□□□ -1.69
SRP9P49458 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.46□□□□□ -1.69
SRP9P49458 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
SRP9P49458 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SRP9P49458 MIR600-201ENST00000385007 98 ntBASIC4.46□□□□□ -1.7
SRP9P49458 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 GTF3AP1-201ENST00000416942 1004 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.46□□□□□ -1.7
SRP9P49458 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 SCARNA21.2-201ENST00000516600 166 ntBASIC4.46□□□□□ -1.7
SRP9P49458 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.46□□□□□ -1.7
SRP9P49458 AC027308.1-201ENST00000517993 110 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.46□□□□□ -1.7
SRP9P49458 AC008126.1-201ENST00000549019 480 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.46□□□□□ -1.7
SRP9P49458 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.46□□□□□ -1.7
SRP9P49458 AP005119.2-201ENST00000579735 1105 ntBASIC4.46□□□□□ -1.7
SRP9P49458 RN7SL708P-201ENST00000580952 299 ntBASIC4.46□□□□□ -1.7
SRP9P49458 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SRP9P49458 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.46□□□□□ -1.7
SRP9P49458 AC095055.1-201ENST00000603472 1113 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms