Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FDFT1P37268 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.11□□□□□ -1.59
FDFT1P37268 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
FDFT1P37268 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FDFT1P37268 BRAFP1-201ENST00000445336 2703 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FDFT1P37268 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FDFT1P37268 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FDFT1P37268 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FDFT1P37268 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
FDFT1P37268 MIR1286-201ENST00000408112 78 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 SNORA11.5-201ENST00000408163 128 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 CHEK2P5-201ENST00000423877 246 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FDFT1P37268 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.1□□□□□ -1.59
FDFT1P37268 RN7SL799P-201ENST00000475891 298 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 RPL5P22-201ENST00000480199 884 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 AGGF1P3-201ENST00000493675 1213 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FDFT1P37268 RNA5SP249-201ENST00000516127 99 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 HNRNPRP2-201ENST00000528421 743 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 AP002373.2-201ENST00000541631 1060 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 DUX4L52-201ENST00000549363 777 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.1□□□□□ -1.59
FDFT1P37268 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 AC126915.2-201ENST00000610957 190 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 AP002505.2-201ENST00000623585 696 ntBASIC5.1□□□□□ -1.59
FDFT1P37268 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
FDFT1P37268 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.1□□□□□ -1.59
FDFT1P37268 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FDFT1P37268 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
FDFT1P37268 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
FDFT1P37268 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 AC126323.6-202ENST00000568092 3511 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.09□□□□□ -1.59
FDFT1P37268 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
FDFT1P37268 AL672167.2-201ENST00000377164 879 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 SNORA70.10-201ENST00000384515 134 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 RAB9AP5-201ENST00000437794 597 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AL391987.1-201ENST00000441025 200 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC245047.2-201ENST00000441060 530 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 PCNPP2-201ENST00000441651 455 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 RAB9AP2-201ENST00000443911 597 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 TCEA1P1-201ENST00000449716 880 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 IGHV5-78-201ENST00000450948 295 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AL389915.2-201ENST00000454576 441 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 RN7SL517P-201ENST00000462240 305 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 NPM1P29-201ENST00000483112 803 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 BTG4P1-201ENST00000510421 183 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 RNA5SP303-201ENST00000516192 130 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 IGLVIV-64-201ENST00000518581 301 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 AC005868.1-201ENST00000536421 331 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 NMNAT1P1-201ENST00000554095 876 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.09□□□□□ -1.59
FDFT1P37268 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 AC011445.2-201ENST00000599274 173 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC104687.2-201ENST00000604442 342 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC087783.2-201ENST00000605070 562 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AC067838.1-201ENST00000606064 577 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 AL159169.2-201ENST00000610061 1269 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.09□□□□□ -1.59
FDFT1P37268 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
FDFT1P37268 AC107021.2-201ENST00000567714 2095 ntBASIC5.09□□□□□ -1.59
FDFT1P37268 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.09□□□□□ -1.6
FDFT1P37268 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
FDFT1P37268 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.09□□□□□ -1.6
FDFT1P37268 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 ZNF733P-202ENST00000444809 1573 ntBASIC5.08□□□□□ -1.6
FDFT1P37268 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.08□□□□□ -1.6
FDFT1P37268 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.08□□□□□ -1.6
FDFT1P37268 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
FDFT1P37268 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
FDFT1P37268 SNORA66-201ENST00000384792 133 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms