Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.88□□□□□ -1.47
SCN4AP35499 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN4AP35499 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SCN4AP35499 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.88□□□□□ -1.47
SCN4AP35499 AL731566.1-201ENST00000620490 1937 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SCN4AP35499 AC025750.1-201ENST00000399891 379 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 ST13P16-201ENST00000401760 781 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 RPEP3-201ENST00000425462 676 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 RN7SL189P-201ENST00000468631 289 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN4AP35499 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.88□□□□□ -1.47
SCN4AP35499 AL133338.2-201ENST00000604292 736 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 AC245389.1-201ENST00000605141 529 ntBASIC5.88□□□□□ -1.47
SCN4AP35499 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 AC007382.1-201ENST00000624376 2618 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.87□□□□□ -1.47
SCN4AP35499 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.87□□□□□ -1.47
SCN4AP35499 AC120338.1-201ENST00000625074 1541 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 CASC19-255ENST00000641733 1385 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 AL122126.1-201ENST00000546905 1318 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 AC006946.1-201ENST00000429106 328 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 snoU13.22-201ENST00000459428 104 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN4AP35499 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 AC007786.3-201ENST00000615154 596 ntBASIC5.87□□□□□ -1.47
SCN4AP35499 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.87□□□□□ -1.47
SCN4AP35499 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
SCN4AP35499 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SCN4AP35499 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
SCN4AP35499 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SCN4AP35499 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SCN4AP35499 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN4AP35499 UQCRBP1-201ENST00000421129 336 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN4AP35499 RPS17P2-201ENST00000461663 408 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 AC022133.1-201ENST00000490961 571 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.86□□□□□ -1.47
SCN4AP35499 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN4AP35499 AC034105.4-201ENST00000568304 277 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.86□□□□□ -1.47
SCN4AP35499 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 AL356608.1-201ENST00000610034 820 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 MIR6133-201ENST00000617057 108 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 DNM1P47-203ENST00000571780 12667 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 AL442639.1-201ENST00000625030 1899 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 AC138907.8-201ENST00000623981 2256 ntBASIC5.86□□□□□ -1.47
SCN4AP35499 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SCN4AP35499 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.86□□□□□ -1.47
SCN4AP35499 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN4AP35499 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
SCN4AP35499 AP001324.1-201ENST00000428553 399 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 AC090018.1-201ENST00000434369 367 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.85□□□□□ -1.47
SCN4AP35499 CYCSP34-201ENST00000458172 304 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN4AP35499 AC106806.2-201ENST00000509365 500 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN4AP35499 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.85□□□□□ -1.47
SCN4AP35499 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN4AP35499 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.85□□□□□ -1.47
SCN4AP35499 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN4AP35499 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN4AP35499 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN4AP35499 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.85□□□□□ -1.47
SCN4AP35499 ADAM24P-201ENST00000398655 2101 ntBASIC5.85□□□□□ -1.47
SCN4AP35499 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
SCN4AP35499 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SCN4AP35499 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SCN4AP35499 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms