Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA13P31271 NMNAT1P1-201ENST00000554095 876 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA13P31271 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 AC019322.1-201ENST00000571869 389 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 AC022884.2-201ENST00000578535 580 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 HMGB1P51-201ENST00000605166 638 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 AC116651.1-201ENST00000609724 556 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA13P31271 LINC00216-201ENST00000623548 1126 ntBASIC5.78□□□□□ -1.48
HOXA13P31271 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.78□□□□□ -1.48
HOXA13P31271 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HOXA13P31271 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.78□□□□□ -1.48
HOXA13P31271 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
HOXA13P31271 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA13P31271 AP000432.2-201ENST00000624164 2048 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA13P31271 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA13P31271 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA13P31271 SNORA48.4-201ENST00000391089 134 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AL035079.1-201ENST00000405210 287 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 SNORA77-201ENST00000408716 125 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 AF186996.5-201ENST00000418098 904 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 RBMY2KP-201ENST00000418221 992 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 AC009238.2-201ENST00000431026 355 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 MTCO1P45-201ENST00000431457 267 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 ARL5AP3-201ENST00000439327 386 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC5.77□□□□□ -1.49
HOXA13P31271 RN7SL319P-201ENST00000480656 221 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC083982.1-201ENST00000485679 344 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 PPP1R11P1-201ENST00000486095 376 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC105233.1-201ENST00000498840 781 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 EIF4A2P5-201ENST00000529914 499 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC027369.5-201ENST00000533838 755 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC008147.3-201ENST00000548666 354 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC074029.2-201ENST00000551045 634 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 MIR4480-201ENST00000582492 71 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC012213.4-201ENST00000606457 354 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 AC026367.3-201ENST00000619032 590 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 AC091953.3-201ENST00000623220 236 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.77□□□□□ -1.49
HOXA13P31271 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 AL121839.2-201ENST00000565058 6943 ntBASIC5.77□□□□□ -1.49
HOXA13P31271 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HOXA13P31271 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.77□□□□□ -1.49
HOXA13P31271 AL442128.2-201ENST00000620246 1824 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXA13P31271 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
HOXA13P31271 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.76□□□□□ -1.49
HOXA13P31271 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
HOXA13P31271 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXA13P31271 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXA13P31271 COX6B1P1-201ENST00000415962 213 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 AL356806.1-201ENST00000422524 916 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 CR848007.2-201ENST00000424918 787 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXA13P31271 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXA13P31271 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 PRPF38AP2-201ENST00000438179 851 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
HOXA13P31271 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HOXA13P31271 AL354714.3-201ENST00000447284 493 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 MTND6P32-201ENST00000457611 483 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXA13P31271 RPL7P16-201ENST00000479738 738 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.76□□□□□ -1.49
HOXA13P31271 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC5.76□□□□□ -1.49
HOXA13P31271 ACTR6P1-201ENST00000514311 1104 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.76□□□□□ -1.49
HOXA13P31271 AC021006.3-201ENST00000530771 192 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 GCSHP4-201ENST00000538792 439 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 AL731537.2-201ENST00000561565 951 ntBASIC5.76□□□□□ -1.49
HOXA13P31271 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
HOXA13P31271 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms