Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.64□□□□□ -1.19
RXRBP28702 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.64□□□□□ -1.19
RXRBP28702 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC7.64□□□□□ -1.19
RXRBP28702 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.64□□□□□ -1.19
RXRBP28702 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.64□□□□□ -1.19
RXRBP28702 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC7.64□□□□□ -1.19
RXRBP28702 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.64□□□□□ -1.19
RXRBP28702 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC7.64□□□□□ -1.19
RXRBP28702 AC025588.4-201ENST00000615802 908 ntBASIC7.64□□□□□ -1.19
RXRBP28702 AC018755.4-201ENST00000619715 454 ntBASIC7.64□□□□□ -1.19
RXRBP28702 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
RXRBP28702 AC007998.4-201ENST00000612496 2533 ntBASIC7.64□□□□□ -1.19
RXRBP28702 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
RXRBP28702 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
RXRBP28702 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.64□□□□□ -1.19
RXRBP28702 MDM4-214ENST00000612738 9407 ntTSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.64□□□□□ -1.19
RXRBP28702 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
RXRBP28702 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC7.64□□□□□ -1.19
RXRBP28702 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC7.63□□□□□ -1.19
RXRBP28702 IQCB2P-201ENST00000401788 1633 ntBASIC7.63□□□□□ -1.19
RXRBP28702 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RXRBP28702 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RXRBP28702 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
RXRBP28702 RNA5SP123-201ENST00000363244 119 ntBASIC7.63□□□□□ -1.19
RXRBP28702 SNORD113-6-201ENST00000363345 75 ntBASIC7.63□□□□□ -1.19
RXRBP28702 SNORA67-201ENST00000384423 137 ntBASIC7.63□□□□□ -1.19
RXRBP28702 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 RN7SKP263-201ENST00000411194 309 ntBASIC7.63□□□□□ -1.19
RXRBP28702 AC105402.1-201ENST00000413336 545 ntBASIC7.63□□□□□ -1.19
RXRBP28702 PTP4A1P5-201ENST00000420305 455 ntBASIC7.63□□□□□ -1.19
RXRBP28702 AC099677.3-201ENST00000427081 395 ntBASIC7.63□□□□□ -1.19
RXRBP28702 FAM96AP1-201ENST00000430879 482 ntBASIC7.63□□□□□ -1.19
RXRBP28702 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC7.63□□□□□ -1.19
RXRBP28702 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.63□□□□□ -1.19
RXRBP28702 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 AC073594.1-201ENST00000462065 364 ntBASIC7.63□□□□□ -1.19
RXRBP28702 NAA50-206ENST00000493454 964 ntTSL 2 BASIC7.63□□□□□ -1.19
RXRBP28702 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 RPL21P131-201ENST00000497298 483 ntBASIC7.63□□□□□ -1.19
RXRBP28702 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 RN7SKP99-201ENST00000517028 307 ntBASIC7.63□□□□□ -1.19
RXRBP28702 RNA5SP400-201ENST00000517155 111 ntBASIC7.63□□□□□ -1.19
RXRBP28702 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC7.63□□□□□ -1.19
RXRBP28702 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC7.63□□□□□ -1.19
RXRBP28702 GARSP1-201ENST00000570895 719 ntBASIC7.63□□□□□ -1.19
RXRBP28702 AC007349.4-201ENST00000608114 532 ntBASIC7.63□□□□□ -1.19
RXRBP28702 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 ZNF91-202ENST00000397082 3572 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
RXRBP28702 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC7.63□□□□□ -1.19
RXRBP28702 KLHL2-204ENST00000506761 2169 ntTSL 5 BASIC7.63□□□□□ -1.19
RXRBP28702 ARRDC3-201ENST00000265138 4188 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
RXRBP28702 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC7.63□□□□□ -1.19
RXRBP28702 CASC19-243ENST00000641588 1546 ntBASIC7.62□□□□□ -1.19
RXRBP28702 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
RXRBP28702 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC7.62□□□□□ -1.19
RXRBP28702 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 AC005332.9-201ENST00000620266 2921 ntBASIC7.62□□□□□ -1.19
RXRBP28702 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC7.62□□□□□ -1.19
RXRBP28702 AP001541.1-201ENST00000623322 1904 ntBASIC7.62□□□□□ -1.19
RXRBP28702 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 AC105235.1-201ENST00000623208 1816 ntBASIC7.62□□□□□ -1.19
RXRBP28702 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC7.62□□□□□ -1.19
RXRBP28702 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 RNU6-1283P-201ENST00000365314 105 ntBASIC7.62□□□□□ -1.19
RXRBP28702 MIR421-201ENST00000365696 85 ntBASIC7.62□□□□□ -1.19
RXRBP28702 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
RXRBP28702 RNA5SP87-201ENST00000384155 118 ntBASIC7.62□□□□□ -1.19
RXRBP28702 RNU6-636P-201ENST00000384598 107 ntBASIC7.62□□□□□ -1.19
RXRBP28702 Y_RNA.559-201ENST00000384686 107 ntBASIC7.62□□□□□ -1.19
RXRBP28702 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC7.62□□□□□ -1.19
RXRBP28702 AL021407.1-201ENST00000404531 386 ntBASIC7.62□□□□□ -1.19
RXRBP28702 OR2W4P-201ENST00000406496 926 ntBASIC7.62□□□□□ -1.19
RXRBP28702 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC7.62□□□□□ -1.19
RXRBP28702 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC7.62□□□□□ -1.19
RXRBP28702 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC7.62□□□□□ -1.19
RXRBP28702 MTATP6P13-201ENST00000438531 667 ntBASIC7.62□□□□□ -1.19
RXRBP28702 AC012512.1-201ENST00000446594 718 ntBASIC7.62□□□□□ -1.19
RXRBP28702 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC7.62□□□□□ -1.19
RXRBP28702 CYCSP20-201ENST00000473154 315 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms